Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92386g00001 ATGTTGCCGGAATCTTCTCCTGTGCAAGAGGTGGTGAACCACGCGGAGGAAGAACCCGCACCCTCCAGATACCGGCAAGGCAGATGGGACCTTGAGGAGCACAGATTATTTCTAATGGGAAATAAAGATCACCCGGGCAAGTGGGCACATATTGCTGCAAATTATGTTAAAACGAGGAGTATGCAACAAGTTGCAAGCCATGCCCAAAAATACTTTATGCATCTTGCCCGACAACAAGAGAAGCCTCCACGACGAGTTCCCAAGGGGAAGAAGAAGAGCATTTTTTACACCACTCTAGATGATGATGATGATGACCATCAACAACCACCTCATGATGGACATGATGTCCCCCTCAACCCCTAA 363 0.4793 MLPESSPVQEVVNHAEEEPAPSRYRQGRWDLEEHRLFLMGNKDHPGKWAHIAANYVKTRSMQQVASHAQKYFMHLARQQEKPPRRVPKGKKKSIFYTTLDDDDDDHQQPPHDGHDVPLNP 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92386g00001 120 MobiDBLite consensus disorder prediction 1 26 - -
Stsc92386g00001 120 MobiDBLite consensus disorder prediction 94 112 - -
Stsc92386g00001 120 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 76 IPR017930 -
Stsc92386g00001 120 CDD SANT 28 72 IPR001005 -
Stsc92386g00001 120 PANTHER TRANSCRIPTION FACTOR KUA1 22 108 - -
Stsc92386g00001 120 SMART sant 25 74 IPR001005 -
Stsc92386g00001 120 Pfam Myb-like DNA-binding domain 27 72 IPR001005 -
Stsc92386g00001 120 NCBIfam myb-like DNA-binding domain, SHAQKYF class 28 74 IPR006447 GO:0003677
Stsc92386g00001 120 SUPERFAMILY Homeodomain-like 25 76 IPR009057 -
Stsc92386g00001 120 Gene3D - 28 74 - -
Stsc92386g00001 120 MobiDBLite consensus disorder prediction 77 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92386g00001 Stsc-Chr92386 620 2681 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc92386g00001 Myb_DNA-binding 3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92386g00001 - - ahf:112773219 70.8626