Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92371g00001 ATGCAAACGGAGTTCACAGATGAAGAAGATGTGTACCATTTCTATAAGACCTATGCAATGGTTCACAACTTTGCTGTGAGGTTGGATCAAGTAAGACGTGATAGCGATGGTTGTGTGGTAATGCGCCAGGTAGTATGTAATCAGGAGGGATCTAGGAGGGAAAGGGTTCAGAGGGGTGAAAGAGTAAGGGACCACCATCCGATGACTAGAAGCAAGTGCCCTGCTAAAATCCGTGCAAGTTTGGATGTTAAGAACTCTAAATGGAAGGTGGTTTCATTCTACGAGGGGCACTTTCATGATTTGGTGGATCCACTCAACATTAAGATGATGCCTGAGTATCGCAACTTTAGTGCCGCAGATAAAGCACATGTAAAAAATTTGTACAACACCGGCATTAGAACATGTCACATCATGGAATACCTAGCTACCCAAAAGGGAGGATTTCTAAATCTGACCTTTAACAAGAAAGACTTGTACAACCTAATTACTCAGCACATTAAAGAAAAAGTCTAA 513 0.4191 MQTEFTDEEDVYHFYKTYAMVHNFAVRLDQVRRDSDGCVVMRQVVCNQEGSRRERVQRGERVRDHHPMTRSKCPAKIRASLDVKNSKWKVVSFYEGHFHDLVDPLNIKMMPEYRNFSAADKAHVKNLYNTGIRTCHIMEYLATQKGGFLNLTFNKKDLYNLITQHIKEKV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92371g00001 170 Pfam FAR1 DNA-binding domain 13 102 IPR004330 -
Stsc92371g00001 170 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 4 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92371g00001 Stsc-Chr92371 1 2681 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc92371g00001 FAR1 3.2e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92371g00001 - - aip:110268388 247.284