Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92361g00002 ATGAAAATTGCTGTTGGAGCTGCAAAGGGTGTAGCCTTTCTCCATGAGGCAGAGAAGCAAGTCATCTACAGAGATTTCAAAGCTTCAAACATCTTGTTAGACTCTGATTACAATGCAAAGCTATCTGATTTTGGGTTAGCAAAGGATGGTCCTGAAGGAGATGATACCCACGTTTCAACTCGTGTTATGGGCACCCAAGGCTATGCTGCCCCAGAATATGTCATGACAGGTCACTTGACAGCAATGAGTGACGTGTACAGCTTTGGGGTGGTATTGTTAGAGCTTCTAACAGGTAGAAGATCAGTGGACAAAAGTAAGGTACCAAGGGAACAAAACCTTGTGGAATGGGCAAGGCCAATGCTTAATGACCCAAGAAAACTTGGAAGGATAATGGACCCTAAACTTGAAGGGCAATACTCAGAGATGGGTTCAAGAAAGGCTGCAGCATTGGCCTACCAATGCCTTAGCCATAGGCCCAGGAACAGGCCCACTATGAGTGCTGTTGTTAGGGTTCTTGAGCCCCTTCAGGACTTTGATGATATTCCAATTATGCCTTTTGTTTATACCGTTACTACTGAAAAGGAAAAGGAAACTCCTTCTCCTTCTCCTTCTCCTAATAATAATAAGGAGAAGAGAAGAGTATTGTTAGAAAGTGGGCATCCTCATAGGAATTATCATAGGCGTCCACATCCACTTACTAAATCTCCCAAGTCACCAAGGCCTCATTCAAATTCACATTCACATTCACATTCAGAGAATGAAAGACACCACCACAGAAATAGAAGATCATCATCAAGTGAATCAGATTCTCCACCTTCACATAATTAA 828 0.4275 MKIAVGAAKGVAFLHEAEKQVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTAMSDVYSFGVVLLELLTGRRSVDKSKVPREQNLVEWARPMLNDPRKLGRIMDPKLEGQYSEMGSRKAAALAYQCLSHRPRNRPTMSAVVRVLEPLQDFDDIPIMPFVYTVTTEKEKETPSPSPSPNNNKEKRRVLLESGHPHRNYHRRPHPLTKSPKSPRPHSNSHSHSHSENERHHHRNRRSSSSESDSPPSHN 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92361g00002 275 Gene3D Transferase(Phosphotransferase) domain 1 1 182 - -
Stsc92361g00002 275 MobiDBLite consensus disorder prediction 192 275 - -
Stsc92361g00002 275 PANTHER OS01G0588500 PROTEIN-RELATED 1 176 - -
Stsc92361g00002 275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 21 33 IPR008271 GO:0004672|GO:0006468
Stsc92361g00002 275 PIRSF TyrPK_CSF1-R 140 272 - -
Stsc92361g00002 275 PIRSF TyrPK_CSF1-R 1 101 - -
Stsc92361g00002 275 ProSiteProfiles Protein kinase domain profile. 1 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc92361g00002 275 Pfam Protein kinase domain 3 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc92361g00002 275 SUPERFAMILY Protein kinase-like (PK-like) 2 195 IPR011009 -
Stsc92361g00002 275 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 1 181 - -
Stsc92361g00002 275 MobiDBLite consensus disorder prediction 193 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92361g00002 Stsc-Chr92361 10769 12225 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92361g00002 1 172 Glycoside Hydrolase AT3G07070 57.225 1.36e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc92361g00002 Pkinase 1.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92361g00002 - - gmx:100799411 353.984