Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92333g00001 ATGATGGCAACCTTGGATAATCCATCAAATGCAGTTGAATGGGCACTTGCAGAAATGATAAACCAACCTGAATTGCTTGAAAAAGCCATTGATGAATTGGACATGGTTGTTGGAAGAGATAGAATGGTTGAAGAATCAGATATCCCAAAGTTGAACTATATAAAAGCTTGTGTAAGAGAAGCTTTTTGTCTTCATCCAGTTGCGCCTTTCAACATTCCTCATGTCTCAATGAAGGACACAATGATTGGCAGTTACCTAATCCCAAAGGGTAGCCATGTCCTGCTAAGCAGACAAGGACTTGGCAGAAACCCTAAAGTTTGGAAGGAGCCAAACAAGTTCAAACCCGAACGATACCTCAAGAATGATGGAAGGCGTGGTTGCCCTGGTGTGATGCTTGGAACCACAATGACTGTCATGCTATTTGCAAGATTGCTTCATGGCTTCCATTGGAGTGCACCTCCTAATGTGTCAAGCATTAACCTTGCTGAGTCTAATGATAATTTGCTTCTTGGTAAGCCACTTGTAGCCATGGCAAAGCCTAGATTAGCTATTGAGTTGTACCAACTGAGTTAA 573 0.4206 MMATLDNPSNAVEWALAEMINQPELLEKAIDELDMVVGRDRMVEESDIPKLNYIKACVREAFCLHPVAPFNIPHVSMKDTMIGSYLIPKGSHVLLSRQGLGRNPKVWKEPNKFKPERYLKNDGRRGCPGVMLGTTMTVMLFARLLHGFHWSAPPNVSSINLAESNDNLLLGKPLVAMAKPRLAIELYQLS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92333g00001 190 PANTHER CYTOCHROME P450 98A9 2 188 - -
Stsc92333g00001 190 PRINTS E-class P450 group I signature 96 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92333g00001 190 PRINTS E-class P450 group I signature 12 38 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92333g00001 190 PRINTS E-class P450 group I signature 55 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92333g00001 190 SUPERFAMILY Cytochrome P450 2 181 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92333g00001 190 Pfam Cytochrome P450 1 171 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92333g00001 190 Gene3D Cytochrome P450 1 168 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92333g00001 Stsc-Chr92333 1766 2392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92333g00001 1 187 Cytochrome P450 AT5G05260 54.902 4.95e-80 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92333g00001 - - gmx:100809902 308.531