Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92317g00001 ACAACTGCAGAAAATGGGCCAAGGGCATTGGAGTTCTTGGGCTTGACAGATAGTCAGCAGAACACCTTGAATGGGAGATCAAAAGTGAATTTGGTTATCACAGACTATTGCATGCCAGGGATGACAGGCTATGAGTTACTTAAGAAAATCAAGGAATCATCCAGCATGAAGGAGGTTCCAGTAGTGATCATGTCATCAGAGAACATACCAACACGGATTAACCAGTGTTTGGAGGAAGGAGCTCAAATGTTCATGTTAAAGCCACTCAAACAATCTGATGTGAAAAAACTGACGTGTCAGTTAATGAATTAG 312 0.4167 TTAENGPRALEFLGLTDSQQNTLNGRSKVNLVITDYCMPGMTGYELLKKIKESSSMKEVPVVIMSSENIPTRINQCLEEGAQMFMLKPLKQSDVKKLTCQLMN 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92317g00001 103 SUPERFAMILY CheY-like 2 102 IPR011006 -
Stsc92317g00001 103 Pfam Response regulator receiver domain 25 96 IPR001789 GO:0000160
Stsc92317g00001 103 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 101 IPR045279 GO:0009736
Stsc92317g00001 103 Gene3D - 1 103 - -
Stsc92317g00001 103 ProSiteProfiles Response regulatory domain profile. 1 102 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92317g00001 Stsc-Chr92317 313 1421 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92317g00001 1 103 Response Regulator Gene Family AT3G56380 74.286 1.38e-50 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc92317g00001 Response_reg 6.4e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92317g00001 K14492 - gmx:100778707 188.734