Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92286g00001 ATGCCCGAGTCCAGGCAATTGAGGATCGAAGGATTGTCAAAATTAAGGGATCTTAAATTGCTTATATTATACCATAAAAACTTTTTAGGAAGCCTTGATTTTCTTTCTCCAAATCTACAATATCTTGCTTGGCATGGCTATCCTTTCCCTTCTTTGCCATCGTTCGAACCTTATAGTAGGCTTGTTGAACTGAACCTGCCTTATAGCAACGTCAAACGACTATGGGAAGGCAACAAGAATATCCCACACCTGGAAAAGGTGGACTTGAGCTACTCAAAGGATCTCATAGAGACACCAAATTTTGGATGGAACCCAAATCTGAAGCGACTAGATTTTACAGGATGCACAAACCTAACACATGTCCACCCCTCAATCGGACTTCTTAAGCAGCTTGCATACTTGAGTTTGCAAAACTGTAGCAGTTTGTTGACCCTCAATCTTGGCGATGATTGTAATTTAAGTTCTCTTAGAGTTCTAAGCTTTTCTGGCTGCACTAAACTTGAGAAGAGCCCGGATTTCACAGGGCTTTCAAATCTTGAGTACCTTGATTTTGAAAATTGTGTAAATTTATCCAAAGTTCATGAATCTATTGGTGCTCTTGCAATGTTAACGTTCTTGAGTTTGAGGGGCTGTGGAAGTATTGTTGGTATGCCCAACGAAGTCAACAATATGATATCTCTTCAAATTCTAGATTTAAGCAGCTGTGGACTAATGAGGAATCCCCTTGGACAGATTTCTATGTCTTCCTGTTATCTAGAAGCTTTGATAAGTCTAGATCTTAGCTCAGGTGGTTCAGGCAGTTTTATAGAAGAGATTCCTAATTCTATTGGAGAGTTGTGTTGTTTAGAAAGACTAAACTTGCAGGGAACTCACTGTAGTCGTGTACCTGATACCATCAAGAAGCTTTCCAGACTGGCATATTTGAATTTGTCGAAATGCAGTAATCTTGAAAGATTGCCTGAGCTCCCATTTGATAGGGCATCGTCAGGGGGAAGGTATTTTCAAACGGTATCTGCATCTCGTAACCGTAGGTCAGGGTTGTATGCTGCACAGGACTACCATAAGAAGAAAAACTTAGATTATATACCAGCTGCGCTTTCATGGTTTGCAAGACTTGTTGAGCAACCCTGTCATTTCCGGTCTGGGTTTGATATCACAATTCCTCAAAATAAGAGTAGTGGAATTCCAGGATGGTATTTCAATCATCAGTTTAAAGGTGGGTCAGCTGTAAGGGTAGTGGACTACGATGATGCAGATGACAACTGGCTTGGCTTTTCATTTTGTGTTACATTTCAGCATGTTATAGATATTTGTGATTCATCTTTTGGTAATCTGCTAAGTCATTTGTATCTTTCTTTTGAAAGTGAGCACACGGAAGAATATTTTGATCAGCAGCCTAAAAATATCCGTCACTTGACTAATACGCATGCTTGGATAATCTATATCTCTCGGGTGCATTGCCATTTTGTGAAAACAGGAGCCCGTATAAGATTTAAAGGCTGCAATAAATTGAAGTTGCATCAATGGGGCTTACGCATGGTCTTCAAACAAGATATAGAGGAACTCAAGAGGTGGTTACAAAGTAAGGATAATATAAAAAACACTACTGGCTTTCATTCTTTTAGATTGGTCGTTGATGAGAATGTGCATCAAGTTGGAAGTAGTAGCTCGGAGTCGGAGACCAAAATCAAGCTTCCTTATAATTGGTTGGTTACCGACGAAGATGAAAATGAGAAGATGGAGGCAAAGGCCAAAGAAGATAATCTCTCTAATTTGGGCCTTATATAG 1788 0.3971 MPESRQLRIEGLSKLRDLKLLILYHKNFLGSLDFLSPNLQYLAWHGYPFPSLPSFEPYSRLVELNLPYSNVKRLWEGNKNIPHLEKVDLSYSKDLIETPNFGWNPNLKRLDFTGCTNLTHVHPSIGLLKQLAYLSLQNCSSLLTLNLGDDCNLSSLRVLSFSGCTKLEKSPDFTGLSNLEYLDFENCVNLSKVHESIGALAMLTFLSLRGCGSIVGMPNEVNNMISLQILDLSSCGLMRNPLGQISMSSCYLEALISLDLSSGGSGSFIEEIPNSIGELCCLERLNLQGTHCSRVPDTIKKLSRLAYLNLSKCSNLERLPELPFDRASSGGRYFQTVSASRNRRSGLYAAQDYHKKKNLDYIPAALSWFARLVEQPCHFRSGFDITIPQNKSSGIPGWYFNHQFKGGSAVRVVDYDDADDNWLGFSFCVTFQHVIDICDSSFGNLLSHLYLSFESEHTEEYFDQQPKNIRHLTNTHAWIIYISRVHCHFVKTGARIRFKGCNKLKLHQWGLRMVFKQDIEELKRWLQSKDNIKNTTGFHSFRLVVDENVHQVGSSSSESETKIKLPYNWLVTDEDENEKMEAKAKEDNLSNLGLI 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92286g00001 595 Pfam Leucine Rich Repeat 61 79 IPR011713 -
Stsc92286g00001 595 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 151 242 - -
Stsc92286g00001 595 SUPERFAMILY L domain-like 13 361 - -
Stsc92286g00001 595 Gene3D Ribonuclease Inhibitor 238 506 IPR032675 -
Stsc92286g00001 595 Gene3D Ribonuclease Inhibitor 5 147 IPR032675 -
Stsc92286g00001 595 Gene3D Ribonuclease Inhibitor 148 237 IPR032675 -
Stsc92286g00001 595 Pfam C-JID domain 392 520 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92286g00001 Stsc-Chr92286 13 2951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92286g00001 152 321 WRKY Transcription Factor Family AT4G12020 34.884 4.16e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92286g00001 - - ahf:112707227 871.307