Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92222g00001 GGTAGAGTCATTGATGATCACATTCATGAAGTCAAAGAAATGAATTTTGAGAACTCCCTCAAACTTTTCTGCCTAAATGCCTTCAACAAGCTTCATCCTCCAGAAGATCAATACTGGGATCTATCAATGATAGCAGTTAAATATGCAAGTGGCATCCCTTTAGCTTTGAAAGTTTTGGGATCTTTCTTGCGATCCAAAACTTACAATGAATGGGAGAGTGCATTGGCAAAACTGAAAGCAATTCCCAATGGAGATATTCAGCAGGAAATGGGCCACAAAATTGTCGATGAAGAATCCATTAAGAACCCTGGAGGGCGTAGCAGGTTGTGGAAATCTGAAGAAGTTCGTGACATATTGAAAAATGACAAAGGGACTGATGCAATTGAGACAATATTCTTGGATATGACTCAAGACACGGAGCTATGTATAAGTACCCAGGCATTTAGGAAGATGCCAAACCTAAGGTTACTTGCTTTTGCAGATAATAAAGCTTTTCAGAAGAAGAAGAAGAAGAAGAAGAGAACAAATGAGACATTGGCCCTTCCAACTGATCTTGAATTGCCTAATAACTTGAGATATATTCAGTGGGATGGATGTCCATTGAAATCTCTCACAACTAGTTGTTGGCCTACTAAGCTTGTTGAACTTTCCATGCCATTCAGCAATGTTGAAAAGCTTTGGGATGGTGAAAAGAATCTACCAAGTTTAGAGATAATTAACCTTGAATGTTCCAGACGCATGAGAGAGTGTCCAAACTTGTCAGGTGCCCCAAATCTAAAACGAGTAAATCTCACTGGGTGTGAAAGCTTGACTCAGGTTCACCCTTCTGTTTTCCGTCTTCCAAAGCTTGAAAGCTTGTGGGTATATGAATGCAAAGCACTTACAAGCCTATCAAGTGAATATTGTTCACCCTCTCTTCAATCAATTGTTGCTTATGATTGCCCTAATCTGCAAGAGTTCTCAGTCCCAATGGTAGGTGATCATTCTGGAATTCATTTGCATCTGAGGTCAACTGCTTTGACAAATCTACCATCATCAATTTTTCATCTTAAGGATCTTGGACACTTCTCTTTTTCAATTAGTGAGAGCTTGATGGATCTTCCTACAAATTTTGCCTATCAAATCATGCTTTCTGACCCTGTTGAACACAAATATGACACTGCAATCACCTTACATAAAGTACTACCTAGCCCTGCCTTTCAATCTGTAGTGCGTCTAATCTTTGATAATTGTTGTAGCTTAACTGAAATCCCAGACAGCATCTCTATGTTATCATCATTAGCGCACTTGAACCTATATAGTTGCACTAATGTCATAACCTTGTCCGAAAGGATTAAGTGCCTTCCACGGCTTCAAGTTCTTAACATTTTTCAATGTCATATGCTACAACTTTTACCAATTCTTCCTCCTTCCCTCAAACGCCTTAGGGTCTGGGATTGCAATCTTCTCAAGACGGTGTTGACTACAATAAGCGAACCACCCAGAAAAGATGAGGCTACATTTTTATTTCTAAACTGCAATAATTTGGATGAGGACTCGTGTAGTACCATCTTGAAAGATGCTATTCTTAGGACAGAACTTGTGGTAAAAGAAACTGAATGTGCAATCCAAGAAGAAGAAATCTTTGATCTTGATCGTGATTGCTATGCAGATTTCAGTGAGATTTGTTATTTGTTGCCAGTTAGAGGCAGTAATATTCGTGACTTGTTTGATGTCCACTCTGTTGAAGCTCATTCGTTGACTGTTGAACTTCCTCAAGATTATAATCTAGTTGGTTTCCTTTTCTTCATTGTTCTTTCCGAAGAAGAATGGAGTGACATAGAAGAAAAAACATGGTACGATGTAATTGACTTCTTAGGCTTCGGTTGTGAATGTTACTTGGAAACAAGTTGGGGTGAAAAGGTTCATGCAGAAAGCTTCTCTTTGTTACAATGGCATTGGGATCAACTCTACCATTATGTTGATATTGCGTCAGATCATATATTATTATGGTATGACGAGGAATGTTGTAAGAAGATAATGGAACCAATTAGAGGGACAGAAGGAAAAGGTATCAATGATGAGAAGGGGTCCTTTGGCAATAATTCAAATCTTACTCTTGAATTCTTTGCTGGAGTGGTGAATAAATTGGACGCAGTGATACAAGAATGTGGCATTCGTTGGATATATCAAAATGTGGACGAAGAAGAAGAAGGATCAAGAGGGCGCAGATCCAAGGGAAGCAGCGAAGAAGCTTATTATGAGGAAGAAGGTTCTGAATCTAATGAGAAAGAGGAATCAATTCCTCCAAAGGAAGAAGGTTCTGAATCTAATGAGCAAGAAGAATCAATTCCTCCAAACAAAAAGCTAACACAAAGTTTGCTAGAACCTCCCTTGATCCTTGAAGGAGAAGAAGTAGTAGAGGACTTGAGGCAAAAACTTGAAGAAATTCTGCATATTGGATTTGATATACAGAGATTTATGTAG 2466 0.3873 GRVIDDHIHEVKEMNFENSLKLFCLNAFNKLHPPEDQYWDLSMIAVKYASGIPLALKVLGSFLRSKTYNEWESALAKLKAIPNGDIQQEMGHKIVDEESIKNPGGRSRLWKSEEVRDILKNDKGTDAIETIFLDMTQDTELCISTQAFRKMPNLRLLAFADNKAFQKKKKKKKRTNETLALPTDLELPNNLRYIQWDGCPLKSLTTSCWPTKLVELSMPFSNVEKLWDGEKNLPSLEIINLECSRRMRECPNLSGAPNLKRVNLTGCESLTQVHPSVFRLPKLESLWVYECKALTSLSSEYCSPSLQSIVAYDCPNLQEFSVPMVGDHSGIHLHLRSTALTNLPSSIFHLKDLGHFSFSISESLMDLPTNFAYQIMLSDPVEHKYDTAITLHKVLPSPAFQSVVRLIFDNCCSLTEIPDSISMLSSLAHLNLYSCTNVITLSERIKCLPRLQVLNIFQCHMLQLLPILPPSLKRLRVWDCNLLKTVLTTISEPPRKDEATFLFLNCNNLDEDSCSTILKDAILRTELVVKETECAIQEEEIFDLDRDCYADFSEICYLLPVRGSNIRDLFDVHSVEAHSLTVELPQDYNLVGFLFFIVLSEEEWSDIEEKTWYDVIDFLGFGCECYLETSWGEKVHAESFSLLQWHWDQLYHYVDIASDHILLWYDEECCKKIMEPIRGTEGKGINDEKGSFGNNSNLTLEFFAGVVNKLDAVIQECGIRWIYQNVDEEEEGSRGRRSKGSSEEAYYEEEGSESNEKEESIPPKEEGSESNEQEESIPPNKKLTQSLLEPPLILEGEEVVEDLRQKLEEILHIGFDIQRFM 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92222g00001 821 Pfam Leucine Rich Repeat 212 231 IPR011713 -
Stsc92222g00001 821 Gene3D Ribonuclease Inhibitor 99 325 IPR032675 -
Stsc92222g00001 821 Gene3D Ribonuclease Inhibitor 330 517 IPR032675 -
Stsc92222g00001 821 SUPERFAMILY L domain-like 131 509 - -
Stsc92222g00001 821 MobiDBLite consensus disorder prediction 756 771 - -
Stsc92222g00001 821 Pfam NB-ARC domain 6 84 IPR002182 GO:0043531
Stsc92222g00001 821 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 88 IPR027417 -
Stsc92222g00001 821 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 80 IPR044974 GO:0006952
Stsc92222g00001 821 MobiDBLite consensus disorder prediction 730 746 - -
Stsc92222g00001 821 Gene3D - 14 94 IPR042197 -
Stsc92222g00001 821 MobiDBLite consensus disorder prediction 730 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92222g00001 Stsc-Chr92222 38 5143 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92222g00001 88 430 WRKY Transcription Factor Family AT4G12020 33.333 3.25e-33 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92222g00001 - - ahf:112777818 1222.99