Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92125g00002 ATGGTGGCTGGAACAATTGGTTATGTTGCACCAGAATATGGACAGACATGGCAGGCTACAACAAAAGGTGATGTGTATAGTTTCGGAGTGCTGGCTATGGAGTTGGCCACAGGGAGAAGAGCAGTGGATGGAGGTGAAGAGAGCTTGGTGGAGTGGGCATGGCGTGTGGTCGGACGGGGACGGCTCGGGCGGGCCCTGCCGGTGTCGGTGATGGGGTCAGGGCTAGTTGGTGGTGCAGAAGAGATGAGTGAAGTGCTTAGAATTGGTGTGAAGTGCACTGCTGAGGCACCATATGCTAGGCCTAATATGAAGGAGGTTCTTGAGATGTTGATTGGGATATACTACTCCAGAGGCTATGGAATCATTGTTTAG 372 0.5215 MVAGTIGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRAVDGGEESLVEWAWRVVGRGRLGRALPVSVMGSGLVGGAEEMSEVLRIGVKCTAEAPYARPNMKEVLEMLIGIYYSRGYGIIV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92125g00002 123 Pfam Protein tyrosine and serine/threonine kinase 6 109 IPR001245 GO:0004672|GO:0006468
Stsc92125g00002 123 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc92125g00002 123 Gene3D Transferase(Phosphotransferase) domain 1 1 118 - -
Stsc92125g00002 123 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 111 - -
Stsc92125g00002 123 SUPERFAMILY Protein kinase-like (PK-like) 2 115 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92125g00002 Stsc-Chr92125 11341 11712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92125g00002 1 110 Receptor kinase-like Gene Family AT5G07280 43.697 2.27e-22 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Stsc92125g00002 PK_Tyr_Ser-Thr 1.6e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92125g00002 - - fve:101304484 181.8