Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92112g00003 ATGGAATCTTGTTTTACCTCCATGATGCTCTCTCAACCAAATTTTTACTTCATCATATTCATGTTTGGCATCATACTTCTCTCCATCAAAATCCTCAAACACAATTATTCAAACAAGAAATCAAAGAAGCCTAGGCTGCCACCAGGTCCGAAACCATGGCCTATAGTTGGTAACCTCCCTCAAATGCTTGCTAACAAACTTACATTCAGATGGATACAAAACATCATGAATGATCTCAACACCGAAATCGCATGCATCCGTCTAGGTAACATCCATGTCATCCCGGTGACAAGCCCTTCCATTGCACGTGAGATTTTAATGAAGCAAGATGCGATCTTCGCATCAAGGCCCTTGAGTTGGTCTAGTGAGCACGTCTCGTTAGGGTACTTAACCATAGGTCCATCACCCTATGGACAACAATGGAAGAAAATGAAGAGAGTAATCACTAATGAATTGTTGGGTCCTTTAAGACTTCAATGGCTGTATGAGAAAAGGGCTGAAGAAGCCGACAACCTTGTTCGGTATGTGTACAACCAATGCAAGAATGGTAGTGCCCTAGTGAATATAAGGCTTGCTGGGCAACACTATGGTGGAAACTTGGTTAGGAGGTTGTTCTTCAATAAGAGGTACTTTGGTAATGGTAGACAAGATGGAGGACCAGGTGCTGAGGAATTGGAACATGTTGAAGCACTGTTGAATGTGTTGAAGTACCTTTTTGCATTTTCCATTTCTGATTATGTTCCATTTTTAAGGGAGTTTGACTTGGATGGTCGTAAGGAAGCCATGAAAGATGCTATTACTACCATAAGGAAGTACCATGATCCCATTATTGAGGAAAGGATTCATCAATGGAGGAATGGGACAAGGACAAATCAAGAGGATTGGCTTGATGTTCTTATATCTCTTAAAGATGCTATAAACGATCCATACTTGACTGCGGAGGAAATTAAAGCTCAAATTATGGAAATTATGATGGCAACCATAGATAATCCATACAATAACGTTGAATGGATACTCTCTGAGATGTTAAATCAGTCAAAGATTTTTCAAAAAGCTATTGAGGAACTAGACAATGTGGTCGGAAAAGAAAGGCTAGTGCAAGAATCAGATATTCCAAAACTCAATTATGTAAAGGCATGTATAAAAGAAGGTTTTCGACTTCACCCAATTGTGGACTTCAACGTCCCTCATGTTTCCATGGAAGACACCATAGTTTTTAACTACTTCATCCCAAAGAGTAGTCATGTTCTTATTAGGAGACAGGGTATTGGCCAAAACCCAAGAATTTGGAAAGAGCCACTGAAATTCCAACCCGAAAGACATTTGAAGAAAAATGGGTCTAGTTTAACTTTAATTGAGCCTAACTTAGAGACTTTCACATTTAGCACTGGAAAGCGGGGTTGCCCTGGAATCACACTTGGTTCTACAATGACTATTATGTTATTTGCAAGATTGGTGCATGCATTCACTTGGATTACACCATCCAATGAGAAAATCATTGATCTCTCTGAATGTGTAGGTGATACTTCAAAAGCTAAGCCACTTGTGGCATTGGGAGAACCAAGGTTAGCTGCCGAGGTTTATCTTAAAATGGATCAGAAAAAGAAAAATATTTGA 1617 0.3952 MESCFTSMMLSQPNFYFIIFMFGIILLSIKILKHNYSNKKSKKPRLPPGPKPWPIVGNLPQMLANKLTFRWIQNIMNDLNTEIACIRLGNIHVIPVTSPSIAREILMKQDAIFASRPLSWSSEHVSLGYLTIGPSPYGQQWKKMKRVITNELLGPLRLQWLYEKRAEEADNLVRYVYNQCKNGSALVNIRLAGQHYGGNLVRRLFFNKRYFGNGRQDGGPGAEELEHVEALLNVLKYLFAFSISDYVPFLREFDLDGRKEAMKDAITTIRKYHDPIIEERIHQWRNGTRTNQEDWLDVLISLKDAINDPYLTAEEIKAQIMEIMMATIDNPYNNVEWILSEMLNQSKIFQKAIEELDNVVGKERLVQESDIPKLNYVKACIKEGFRLHPIVDFNVPHVSMEDTIVFNYFIPKSSHVLIRRQGIGQNPRIWKEPLKFQPERHLKKNGSSLTLIEPNLETFTFSTGKRGCPGITLGSTMTIMLFARLVHAFTWITPSNEKIIDLSECVGDTSKAKPLVALGEPRLAAEVYLKMDQKKKNI 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92112g00003 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Stsc92112g00003 538 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92112g00003 538 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92112g00003 538 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92112g00003 538 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92112g00003 538 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92112g00003 538 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92112g00003 538 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92112g00003 538 FunFam Cytochrome P450 9 39 526 - -
Stsc92112g00003 538 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 14 528 - -
Stsc92112g00003 538 SUPERFAMILY Cytochrome P450 47 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92112g00003 538 Gene3D Cytochrome P450 38 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92112g00003 538 Pfam Cytochrome P450 47 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92112g00003 Stsc-Chr92112 8991 11819 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92112g00003 8 528 Cytochrome P450 AT5G05260 51.412 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92112g00003 - K12153 gmx:100809902 645.966