Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92112g00002 ATGCTTTCTCACCCAATTATCTGCTTGTTACTCGTGTTATTTTGCATCATAACCCTATACATCAAAATCCTCAAACACAACGACTCAACCAAGAAACCAAACAAACCTAGCCTCCCACCAGGTCCCAAACCGTGGCCTATAGTTGGTAACCTCCCTGAAATGCTTGCTAACAAACCCACATTCAGATGGATTCAAAACATCATGAATGATCTTAACACCGAAATTGCATGCATCCGTCTAGGTAACATTCATGTTGTCCTGGTGACAAGCCCTTCAATTGCACGTGAGATTTTAATGAAGCAGAATGCGATATTCGCATCGAGGCCATCGAATTGGTCTAGTGAGCATGTCTCATTGGGGTACCTATCCGCGGCTCTAACGCCATTCGAAGGACAATGGAAGAAAATGAGAAGATTAATCACCAATGAATTGGTGTCTCCGGTTCGGCTTCAGTGGTTACATGACAAGAGGGCAGAAGAAGCCGACAACCTTGTCCGGTATGTGTACAACCAATGCAAGAATGGAAGTGCCCTTGTGGATATAAGGCTTGCAGGGAAACACTATGCTGGAAACTTGATTCGGAGGTTGATCTTCAACAAGAGGTACTTTGGTAATGGTAGAGAAGATGGAGGCCCTGGTGCTGAGGAATTGGAACATGTTGAAGCATTGTTGATTCTGCTAAAGTACCTTTTTGCATTTTCTGTTTCTGATTACGTTCCATTGTTGAGGGAGTTTGACTTGGATGGTCATAAGAAAGCAATGAAAGAGGCTACTAATACCATAAGGAAGTACCATGATCCCATCATTGAAGAAAGGATTCATCAATGGAAGAATGGGACAAGGACACATCAAGAGGATTTGCTTGATGTTCTTATATCTCTTAAAGATGCTACCAACAATCCACTTTTGACTTTGGAGGAAATCAAATCTCAAATTATGGAAATTATGATAGCAACAATAGATAACCCATACAATAATATTGAATGGGTACTCTCTGAAATACTAAATCAACCAAAGCTCCTTCAAAAGGCCACAGAGGAACTAGATAATGTGGTGGGAAAAGAGAGGATAGTGCAAGAATCAGATATACCAAAACTCAACTATGTAAAGGCATGTATAAAAGAAGGTTTTCGACTTCACCCTATTGATGATTTCAACGTGCCTCATGTCGCCATGGAAGACACCATAGTGTTTAACTACTTCATCCCAAAGGGTACTCATGTTCATATTAGGAGACAGGGTATTGGTCAAAATCCAAGAATTTGGAAAGAGCCACTGAAATTCAACCCCGAAAAACACTTGAAGAATGATGATAGGCCTAGTTTAACTTTAGTTGATTCTAATTTAGAGACTTTCATATTTGGCACTGGAAAGCGTGGTTGCCCTGGAGTCACACTTGGTTCCACAATTACTATTATGTTATTTGCAAGATTGGTGCATGGATTCACTTGGATTACACCATCCAATGAGAAAATCATTGATCTGTCTGAATGTGTAGGTGATACTTCAAAAGCTAAGCCACTTGTGGCATTGGGAAAACCAAGGTTAGCAGGAGAGGTTTATCACAAAATGAATCAAATGAAAAATATCAAATGA 1596 0.4023 MLSHPIICLLLVLFCIITLYIKILKHNDSTKKPNKPSLPPGPKPWPIVGNLPEMLANKPTFRWIQNIMNDLNTEIACIRLGNIHVVLVTSPSIAREILMKQNAIFASRPSNWSSEHVSLGYLSAALTPFEGQWKKMRRLITNELVSPVRLQWLHDKRAEEADNLVRYVYNQCKNGSALVDIRLAGKHYAGNLIRRLIFNKRYFGNGREDGGPGAEELEHVEALLILLKYLFAFSVSDYVPLLREFDLDGHKKAMKEATNTIRKYHDPIIEERIHQWKNGTRTHQEDLLDVLISLKDATNNPLLTLEEIKSQIMEIMIATIDNPYNNIEWVLSEILNQPKLLQKATEELDNVVGKERIVQESDIPKLNYVKACIKEGFRLHPIDDFNVPHVAMEDTIVFNYFIPKGTHVHIRRQGIGQNPRIWKEPLKFNPEKHLKNDDRPSLTLVDSNLETFIFGTGKRGCPGVTLGSTITIMLFARLVHGFTWITPSNEKIIDLSECVGDTSKAKPLVALGKPRLAGEVYHKMNQMKNIK 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92112g00002 531 Gene3D Cytochrome P450 23 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92112g00002 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Stsc92112g00002 531 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 9 522 - -
Stsc92112g00002 531 Pfam Cytochrome P450 39 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92112g00002 531 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92112g00002 531 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92112g00002 531 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92112g00002 531 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92112g00002 531 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92112g00002 531 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92112g00002 531 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92112g00002 531 FunFam Cytochrome P450 9 31 519 - -
Stsc92112g00002 531 SUPERFAMILY Cytochrome P450 39 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92112g00002 Stsc-Chr92112 1536 3568 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92112g00002 11 521 Cytochrome P450 AT4G39950 51.172 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92112g00002 - K12153 gmx:100809902 636.336