Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92097g00001 GATCAACGCCTTAATGATATTGTTGGCAGTGCCTACTATGTCGCCCCTGAAGTTCTGCATAGATCTTACAGTGTTGAAGCAGACTTATGGAGTATTGGAGTTATATCATACATATTGTTATGTGGAAGTAGACCATTTTGGGCGCGCACTGAATCAGGAATATTCCGGTCTGTGTTAAGAGCAAATCCTAACTTTGATGATACACCTTGGCCATCAATATCACCAGAAGCTAAAGACTTTGTTAAGAGACTATTGAACAAGGACCACAGGAAAAGAATGACTGCTGCCCAAGCTCTAACTCATCCATGGTTGAGGAATGAAAACGTTCCCCTTCCGTTAGATATTTTGATTTACAAGTTAGTCAAGTCGTACGTGCGTGCCTCACCTTTGAAGCGTGCTGCATTGAAGGCTCTCTCAAAAGCATTGACAGAAGATGAACTTATCTACCTTAGAGCGCAATTTAGCCTATTGGAACCAAAAGATGGCTATGTTTCACTTGATAATTTTAGAGGGGCTCTTATGAAAAATTCAACTGATGCCATGAAGGAATCAAGGGTCCCTGACATTTTACATTTGATGGAACCATTGTCGTACAAAAAAATGGACTTCGAAGAGTTCTGCGCTGCTGCAATCAGTGTATACCAGCTGGAGGTTCATCCGGAATGGGACAACATCGCTACCACAGCATTTGAGCATTTTGAAGAGGCAGGGAACCGAGCCATTTCAGTAGAGGAATTGGCACAGGAGATGAGTTTGGGACCTTCTGCTTATGCTCTAATGGGTGATTGGATCAGAAGATCGGACGGAAAACTCAGCTTTGTCGGATTCACAAAGTTTTTGCACGGCGTCACGCTTCGCAGTTCGAACACTAGACATCACAGACCAGTAGTATAG 894 0.4318 DQRLNDIVGSAYYVAPEVLHRSYSVEADLWSIGVISYILLCGSRPFWARTESGIFRSVLRANPNFDDTPWPSISPEAKDFVKRLLNKDHRKRMTAAQALTHPWLRNENVPLPLDILIYKLVKSYVRASPLKRAALKALSKALTEDELIYLRAQFSLLEPKDGYVSLDNFRGALMKNSTDAMKESRVPDILHLMEPLSYKKMDFEEFCAAAISVYQLEVHPEWDNIATTAFEHFEEAGNRAISVEELAQEMSLGPSAYALMGDWIRRSDGKLSFVGFTKFLHGVTLRSSNTRHHRPVV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92097g00001 297 Gene3D Transferase(Phosphotransferase) domain 1 1 109 - -
Stsc92097g00001 297 Gene3D - 121 279 - -
Stsc92097g00001 297 SUPERFAMILY EF-hand 137 282 IPR011992 -
Stsc92097g00001 297 Pfam Protein kinase domain 3 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc92097g00001 297 ProSiteProfiles Protein kinase domain profile. 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc92097g00001 297 Gene3D - 143 211 - -
Stsc92097g00001 297 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 262 - -
Stsc92097g00001 297 FunFam CDPK-related kinase 1 140 211 - -
Stsc92097g00001 297 SUPERFAMILY Protein kinase-like (PK-like) 3 127 IPR011009 -
Stsc92097g00001 297 SMART serkin_6 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc92097g00001 297 FunFam Calcium-dependent protein kinase SK5 14 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92097g00001 Stsc-Chr92097 1689 4903 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92097g00001 1 291 EF-hand Containing Proteins AT2G46700 73.288 4.53e-155 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Stsc92097g00001 Pkinase 7.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92097g00001 K13412 - gmx:100803631 517.309