Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92062g00001 ATGCTTTCCACAACTTATAATAATAATGGTTCCTTTCTACTACTACTTGCTACTGTTATTCTCTTGGTTCTGCCTTTTATACCTCCCTCAAATGCTCAATTGAGTTCAACCTTCTATTCAAGCACATGTCCCAATGTATCATCCATTGTTAGTAATGTTATTCAGCAAGCTCGGCAGTCCGATCCACGTATTACTGCAAGCCTCACTAGGCTTCACTTTCATGATTGCTTTGTCAATGGGTGTGATGCGTCCCTGTTGCTAGACGTGGGTGGCAACATAACAGAGAGCGAGAAAACTGCAGCTCCTAATAACAATTCAGCCAGGGGCTTTGATGTAATTGACAACATTAAAGCCGCTCTTAATGCATCATGCCCTGGTATAGTGTCTTGTGCTGATATTCTTGCCCTTGCAGCTCAAGCTTCAGTCTCCTTGGAAGGAGGTCCTTCATGGAACGTACTACTTGGAAGAAGGGATGGTTTTACTGCGAACAAAGCTGGAGCCAATACCTCTCTTCCTACTCCATTTGAGACTCTAGCTCAGATCACTGCCAAATACAATGCAGTTAATCTGAGTACAACGGATCTCGTTGCATTATCTGGTGCACACACATTTGGACGCGCCCAATGCAAATTCTTCTCCCAAAGGCTCTATAACTTCAATGGCACAGGCAACCCTGATCCAACATTGAACTCAACCTACTTAACAACTCTACAACAGAACTGTCCCCAAAACGGAAACGGTTCAACTCTCAACAAATTGGACCCTTCCACCCCCAACGCATTCGACAACAACTACTTCACCAACCTTCTCAACAATCAGGGCCTTCTCCAAACGGACCAAGAACTCTTCTCCACTAACGGATCTTCAACGGTTTCAATTGTCAACAACTTTGCTAACAATCAAACTGCTTTCTTCCAAGCATTTGCTCAGGCAATGATCAATATGGGCAATATTAGTCCCTTGACGGGGTCTCAAGGTGAAATCAGAAACGATTGTAAGAAAGTTAACGGAAGTTAA 1017 0.4356 MLSTTYNNNGSFLLLLATVILLVLPFIPPSNAQLSSTFYSSTCPNVSSIVSNVIQQARQSDPRITASLTRLHFHDCFVNGCDASLLLDVGGNITESEKTAAPNNNSARGFDVIDNIKAALNASCPGIVSCADILALAAQASVSLEGGPSWNVLLGRRDGFTANKAGANTSLPTPFETLAQITAKYNAVNLSTTDLVALSGAHTFGRAQCKFFSQRLYNFNGTGNPDPTLNSTYLTTLQQNCPQNGNGSTLNKLDPSTPNAFDNNYFTNLLNNQGLLQTDQELFSTNGSSTVSIVNNFANNQTAFFQAFAQAMINMGNISPLTGSQGEIRNDCKKVNGS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92062g00001 338 ProSiteProfiles Plant heme peroxidase family profile. 33 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc92062g00001 338 Pfam Peroxidase 51 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc92062g00001 338 CDD secretory_peroxidase 33 335 IPR033905 GO:0004601|GO:0042744
Stsc92062g00001 338 SUPERFAMILY Heme-dependent peroxidases 33 336 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc92062g00001 338 PANTHER PEROXIDASE 72-RELATED 31 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92062g00001 338 FunFam Peroxidase 172 315 - -
Stsc92062g00001 338 Gene3D Peroxidase, domain 2 172 315 - -
Stsc92062g00001 338 Gene3D - 38 336 - -
Stsc92062g00001 338 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc92062g00001 338 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc92062g00001 338 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc92062g00001 338 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc92062g00001 338 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc92062g00001 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Stsc92062g00001 338 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92062g00001 338 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92062g00001 338 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92062g00001 338 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92062g00001 338 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92062g00001 338 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92062g00001 338 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92062g00001 338 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92062g00001 338 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92062g00001 338 FunFam Peroxidase 37 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92062g00001 Stsc-Chr92062 5829 8010 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92062g00001 14 338 Peroxidase AT5G06720 70.462 3.41e-167 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92062g00001 K00430 - gmx:100811249 513.457