Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92061g00001 ATGCTTTCGTCGTCTTCCTCCTCGTCCTCGTCATCGTCCTCGTTGTCGTCCCTGTGTTTGCCAACAAAATGGGCTTGCAAGCATTGCAATAAGAAATTTAATTGTGGAAGAGCTTTAGAGGGTTATATAAGAACTCATAACACCAAAATGAGATTCTCCAACGACAAAAAGACACCAAAAACACCAAAAAGAAAGAGAAGTAATAATAATAATAATTTTTTATTATTAAGCTGGAAGGTTCACAAGAAGAGAGGAAACAACCAACAACAAATAGTAGTGGAAGAAGAAAGCAAGAAGTCAAAGACACAACAAAAAGAAGAAAGAAATAGTGATGATGATGAAGATCAAGAAGAGAAGAAAAGGTTGTTAGAGAGGTTGAAAGAATTTGAAGAAGCAGGGCATAAGATTTCAAGAAGGATTAGAGAAAGATTTGTTTGTCACACTTGCAAGATGGTGTTCCCAACATTTCATGCAGTGGGTTGCCATGTTTATAATGAGGAGAAGAAGATTAAGAATCTTTCTTCTTCTAATCCAATGTCATCACCACCAATAACAGCCAATGAAGAGGATGATAAGAAGAAAGCTGGTAAGAGCAGTGCGAAATATGAGCTTCAAAGACATTATAACGCTAAGAAATTGAGGCAGAGAGGGAAGGGGACGTTCGAATTGAAAGAGAGACAAGAAGAAAGGGTTGCCGACAGTGTTGCGATGGGAACTCTACAGCGGCGAGAGGGGCTTGGAGGCTTTGTGAACAGACTGAGACGGGAAAGAAGTAGAAGACGGAAGTTGCGGCGCAATGGTGGTAGGGGATGGCTCGTGTGCAATAATGAAAGAGACAGAAGGAATGGAATATTAGGTTAA 861 0.4007 MLSSSSSSSSSSSSLSSLCLPTKWACKHCNKKFNCGRALEGYIRTHNTKMRFSNDKKTPKTPKRKRSNNNNNFLLLSWKVHKKRGNNQQQIVVEEESKKSKTQQKEERNSDDDEDQEEKKRLLERLKEFEEAGHKISRRIRERFVCHTCKMVFPTFHAVGCHVYNEEKKIKNLSSSNPMSSPPITANEEDDKKKAGKSSAKYELQRHYNAKKLRQRGKGTFELKERQEERVADSVAMGTLQRREGLGGFVNRLRRERSRRRKLRRNGGRGWLVCNNERDRRNGILG 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92061g00001 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 24 51 IPR013087 -
Stsc92061g00001 286 Coils Coil 112 132 - -
Stsc92061g00001 286 MobiDBLite consensus disorder prediction 50 71 - -
Stsc92061g00001 286 MobiDBLite consensus disorder prediction 94 119 - -
Stsc92061g00001 286 MobiDBLite consensus disorder prediction 173 204 - -
Stsc92061g00001 286 MobiDBLite consensus disorder prediction 84 119 - -
Stsc92061g00001 286 MobiDBLite consensus disorder prediction 186 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92061g00001 Stsc-Chr92061 7906 9477 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Stsc92061g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92061g00001 - K09228 soe:110783269 37.3502