LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc92056g00001	ATGATGGCTACGGCTGCTTCTGAACTTTCAATTTCAATGGCTTCTCTATCTTTTTCTCACTTCTTCAATAATCATGTTCCTTCCATTCTGCATCTTCTTCTTCTTCTAATCGGCCTCTCTTGCCTTCCAATTTTCGTTCAACCATTATCCTTCAACATAACCAACTTTGATGACCCTGCTAGTGCAACCCAAATGGCATATGAAGGTGATGCAAGATCCAGCAATGGATCCATCGACCTCAACAAAGTCATCTATGACTTCAGGGTTGGCCGTGCCATCTACGCCCAACCCCTTCACCTTTGGGATTCAGCCACCAAAGCTCTCACAAGCTTCTCCACAAGCTTCACATTCACCATTGATGCAGTCAACGACACAAAGATCGGTGATGGTTTTGTCTTCTATTTGGCACCTCTTGGCTACCAAATCCCACCAAATTCAGCTGGTGGAACTTTTGCTCTCTTCAATGCAACAACCAACCTCAACAACCAACCACAAAACCATGTTGTGGCGGTTGAGTTTGACACTTTTATTGGCTCAATTGACCCACCATTTCAGCATGTGGGGATTGATGATAACTCCCTTACTTCACTTGCTACTGCTAGGTTTGATATTGACAACAACCTTGGTGTGAAGTGTTTCGCTTTGATTTCTTACGACGGTTCGACCAAGACACTCGCAGTGTCCTGGTCGTTCAGTGGAACCAGTCGCAGTAACAAAACTGCTGCGACTGCGTCCACCTCCAATAATTCTTCTCCGAGTTCTTTGTCTTACAACATTGACCTCATGCAAGCTCTTCCAGAGTGGGTGAACTTGGGGTTTTCGTCCTCGACTGGGTTATCCACCGAGCGAAACGTTATTTATTCTTGGGAGTTTCATTCAACTTTGGGTGGGGAAATGGGGAAGGCTCAAAACAAGAAGCTGAACTTTGTTGTGGTGGTTGTCCCTGTAGTGGTTACAATTGTTTTATTGTCTGTAGCGGTTACTGTTGGTTGCTTGATCATCAAGAAGAGGAGAAAGAGGACTAATGTCGAAGGCGGCGGCGAATACTACTCTGGACAGTGCTCTGTCGAGTTTGATCTCGACAGAGCAACTTTCCCAAGGAGATTCGACTACAAAGAGCTGGTTGCGGCCACTGACAGTTTCGCAGATGACAAGAGGCTCGGACAAGGAGGGTCAGGAGAAGTCTACAAAGGCGTCTTGAGCTATCTAGGCAGAGTTGTCGCTGTGAAGAGGATCTTCGCCGACTTCGAAAACTCGGAGAGAGTTTTCAACAACGAGGTAAGGATCATAAGCCGTTTGATTCACAAGAACTTGGTCCAATTCATAGGTTGGTGCCATGAGGAAGGTGAATTGCTGCTTGTTTTCGAGTACATGCCGAACGGAAGCCTTGACAGTCACCTTTTCGGTAACAAGAAGAGCCTGCCATGGAATTTGAGGTACAAGGCGGCAATAGGCGTGGCAAAGGCGCTTCATTATCTCCATGAAGATGCAGAGCAATGCGTTCTTCATAGAGATATTAAGTCAGCTAATGTGCTTCTAGACAATGATTTTAGCACTAAGCTTGGTGATTTCGGCATGGCGAAATTGATGGATCCAAGGTTAAGGACTCAAAGGACAGGGGTTGTGGGAACATATGGGTACTTGGCTCCTGAATATATCAATGGAGGGAGGGCAAGCAAGGAGTCTGATATGTATAGCTTTGGGGTTGTGGCATTGGAGATTGCAAGTGGGAGAAGGACTTTTAGGGATGGGGAGTTTCATGTGCCAATAACAAGTTGGATATGGCAGCTTTATGTTGATGGGAATCTTATGGATGGTGCTGATGAGAGGTTGAGTAAGGACTTTAATGTGAATGAGATGATGAGTTTGCTTACTGTGGGGTTATGGTGTACACACCCTGATGTTAAGGAAAGGCCAAAGGCAGCACAAGTTATTAAGGTTCTTCAGCTTGAGGCTCCATTACCAGAACTTCCTAAAGATATGCATCATAATATTGTTCTTCCACAACGGTCAAACGCCGAGCAACAACCACATTGCTCCGTTGAATCGCCGCCGGCCATTACTACTAGTCTTGTTTACGGTGGACGGTAA	2091	0.4567	MMATAASELSISMASLSFSHFFNNHVPSILHLLLLLIGLSCLPIFVQPLSFNITNFDDPASATQMAYEGDARSSNGSIDLNKVIYDFRVGRAIYAQPLHLWDSATKALTSFSTSFTFTIDAVNDTKIGDGFVFYLAPLGYQIPPNSAGGTFALFNATTNLNNQPQNHVVAVEFDTFIGSIDPPFQHVGIDDNSLTSLATARFDIDNNLGVKCFALISYDGSTKTLAVSWSFSGTSRSNKTAATASTSNNSSPSSLSYNIDLMQALPEWVNLGFSSSTGLSTERNVIYSWEFHSTLGGEMGKAQNKKLNFVVVVVPVVVTIVLLSVAVTVGCLIIKKRRKRTNVEGGGEYYSGQCSVEFDLDRATFPRRFDYKELVAATDSFADDKRLGQGGSGEVYKGVLSYLGRVVAVKRIFADFENSERVFNNEVRIISRLIHKNLVQFIGWCHEEGELLLVFEYMPNGSLDSHLFGNKKSLPWNLRYKAAIGVAKALHYLHEDAEQCVLHRDIKSANVLLDNDFSTKLGDFGMAKLMDPRLRTQRTGVVGTYGYLAPEYINGGRASKESDMYSFGVVALEIASGRRTFRDGEFHVPITSWIWQLYVDGNLMDGADERLSKDFNVNEMMSLLTVGLWCTHPDVKERPKAAQVIKVLQLEAPLPELPKDMHHNIVLPQRSNAEQQPHCSVESPPAITTSLVYGGR	696

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc92056g00001	696	Pfam	Legume lectin domain	49	299	IPR001220	GO:0030246
	Stsc92056g00001	696	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	501	513	IPR008271	GO:0004672\|GO:0006468
	Stsc92056g00001	696	ProSitePatterns	Legume lectins alpha-chain signature.	265	274	IPR000985	-
	Stsc92056g00001	696	FunFam	L-type lectin-domain containing receptor kinase IX.1	366	457	-	-
	Stsc92056g00001	696	CDD	STKc_IRAK	387	649	-	-
	Stsc92056g00001	696	Gene3D	-	47	308	-	-
	Stsc92056g00001	696	Gene3D	Phosphorylase Kinase; domain 1	356	457	-	-
	Stsc92056g00001	696	Gene3D	Transferase(Phosphotransferase) domain 1	458	654	-	-
	Stsc92056g00001	696	SMART	serkin_6	381	650	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Stsc92056g00001	696	FunFam	L-type lectin-domain containing receptor kinase IX.1	458	658	-	-
	Stsc92056g00001	696	PANTHER	-	74	653	-	-
	Stsc92056g00001	696	ProSitePatterns	Legume lectins beta-chain signature.	169	175	IPR019825	-
	Stsc92056g00001	696	SUPERFAMILY	Concanavalin A-like lectins/glucanases	47	295	IPR013320	-
	Stsc92056g00001	696	CDD	lectin_legume_LecRK_Arcelin_ConA	49	295	IPR001220	GO:0030246
	Stsc92056g00001	696	SUPERFAMILY	Protein kinase-like (PK-like)	365	671	IPR011009	-
	Stsc92056g00001	696	Pfam	Protein kinase domain	382	646	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Stsc92056g00001	696	ProSiteProfiles	Protein kinase domain profile.	381	657	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Stsc92056g00001	696	ProSitePatterns	Protein kinases ATP-binding region signature.	387	410	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc92056g00001	Stsc-Chr92056	7478	9568	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc92056g00001	33	661	Receptor kinase-like Gene Family	AT5G10530	44.393	1.75e-172	506

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Stsc92056g00001		Pkinase	2e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc92056g00001	-		-	gmx:100791220	848.966