Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92043g00001 ATGTCTGACTCACTTTCAACTTTCTTTTCTCTTTCTTCTTGTTCTTCTTCTCCATTTTTTCCCCTTCTTGCTCTTCTTGTCATCTTCATTTTCATTTTCATCATCAAGAGGAGGCAATCCAAGCCTAAGCTCAACCTTCCACCCGGTAAAATGGGGTGGCCCTTTATTGGTGAAAGCATTGGTTACTTGAGGCCTTATTCTGCTACCACAGTAGGAGAATACATGGACCAACACATAGCAAGGTATGGTAAAATTTTCAAGTCGAAATTGTTTGGTGAGCCAGCAATAGTGTCAGCAGATGCAGGGTTAAATAAGTTCATACTGCAAAACGATGGGAAATTGTTTCAGGTGAGTTACCCGAGTAGCTTGGGTGGAATACTTGGGAAATGGTCTATGTTGGTTTTGGTTGGTGACATGCATAGGGACATGAGGGCCATTTCACTCAACTTCCTCAGCCAGGCCAGGCTCAAAGCTCATCTCTTGAAGGACGTTGAGAAGCATTCTCTTATTGTTCTTAACTCTTGGAAACACAATTCCACCTTCTCTGCTCAAGATGAAGCCAAAAGGTTCACCTTCAATTTCATGGCCAAACACATCTTGAGCTTGGATCCTGGGAATGTTGAGACTGAACATATAAAAGATATGTATGCCAATTTCATGAAGGGTGTTGTTTCTGTGCCATTGAACTTACCTGGAACTGCATATAGAAAAGCCTTAAAGTCTAGGAACACCATTCTGAAGTTCATAGAAGGGAAATCAAATGAGAGAGTGGGAAAGATAGAAGGAGGAAATGGGACTTGGGAGGAAGATGATCTTCTAGGATGGGTACTGAAAAATTCAAAACTCTCGACAGAGCAGATTCTTGACTTGGTTCTAAGTTTGCTCTTTGCTGGCCATGAAACTTCTTCAATAGCCATATCCCTTGCCATTTACTTCTTGCCCGGTTGTCCTCAAGCCATAGAGCAGTTAAGGGAAGAACACAGAGAAATTGCAAGAGCTAAGAAACAAGTAGGGAATGTTGAACTCACTTGGGATGACTACAAAAGAATGGAATTTACCCACTGTGTTGTGAACGAGACACTTCGATTGGGAAATGTTGTGAGGTACCTTCACAGGAAAGCTCTCAAAGATATTCAATACAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTTCCGGTGATTGCAGCCCCGCATCTGGATCCTTCACTTTTTGACCAACCTCAGCAATTCAATCCATGGAGATGGCAGAACAATGGTGGTCGTGGAAATTGCTCATCATCGAAAGGGAATAGTGCCAACACCGTTAGCAACAACCTTTTCTCGCCGTTCGGAGGAGGACCACGACTATGCGCCGGGGCAGAGTTAGCGAAGATTGAAATGGCTATTTTCATCCACCATCTCGTCCTCAAATACGATTGGGAATTAGCTAGTTCCGATGAACCTTATGTATACCCTTTTGTTGATTTCCCCAAAGGCCTACCCATCACCGTCAAAACCCACTCATATCTCTCTTAG 1518 0.4315 MSDSLSTFFSLSSCSSSPFFPLLALLVIFIFIFIIKRRQSKPKLNLPPGKMGWPFIGESIGYLRPYSATTVGEYMDQHIARYGKIFKSKLFGEPAIVSADAGLNKFILQNDGKLFQVSYPSSLGGILGKWSMLVLVGDMHRDMRAISLNFLSQARLKAHLLKDVEKHSLIVLNSWKHNSTFSAQDEAKRFTFNFMAKHILSLDPGNVETEHIKDMYANFMKGVVSVPLNLPGTAYRKALKSRNTILKFIEGKSNERVGKIEGGNGTWEEDDLLGWVLKNSKLSTEQILDLVLSLLFAGHETSSIAISLAIYFLPGCPQAIEQLREEHREIARAKKQVGNVELTWDDYKRMEFTHCVVNETLRLGNVVRYLHRKALKDIQYKGYDIPCGWKVLPVIAAPHLDPSLFDQPQQFNPWRWQNNGGRGNCSSSKGNSANTVSNNLFSPFGGGPRLCAGAELAKIEMAIFIHHLVLKYDWELASSDEPYVYPFVDFPKGLPITVKTHSYLS 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92043g00001 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Stsc92043g00001 505 Gene3D Cytochrome P450 35 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92043g00001 505 PANTHER CYTOCHROME P450 26 42 479 - -
Stsc92043g00001 505 FunFam Cytochrome P450 90B1 36 500 - -
Stsc92043g00001 505 SUPERFAMILY Cytochrome P450 43 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92043g00001 505 CDD CYP90-like 78 498 - -
Stsc92043g00001 505 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92043g00001 505 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92043g00001 505 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92043g00001 505 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92043g00001 505 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92043g00001 505 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92043g00001 505 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92043g00001 505 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92043g00001 505 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92043g00001 505 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92043g00001 505 Coils Coil 316 343 - -
Stsc92043g00001 505 Pfam Cytochrome P450 47 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92043g00001 Stsc-Chr92043 4639 8363 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92043g00001 36 418 Cytochrome P450 AT3G50660 69.059 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92043g00001 K09587 - gmx:100789515 794.653