Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92041g00001 ATGATGATGAGCCTTATAGGATTAGGGTCTTCTCAATTGTCATCAAATTTTTATGCAACAAAATGTCCGAATGCACTTTCAACAATTAAGTCAGGAGTGAATTCTGCTGTGAGCAAAGAAGCTCGCATGGGAGCTTCCCTTCTTCGCCTTCATTTCCATGATTGCTTTGTTCAAGGATGTGATGCATCAGTGTTATTAGATGATACAGCAAATTTCACAGGAGAAAAAACAGCACGTCCTAATGCTAATTCAATTAGAGGTTTTGAAGTCATAGACACCATAAAATCTCAAGTAGAGAGCTTGTGTCCTGGTGTTGTTTCTTGTGCTGATATTCTTGCTGTTGCTGCTAGAGATTCTGTTGTTGCTCTTGGTGGACCCAGTTGGGCAGTGCAATTGGGAAGAAGAGACTCAACCACAGCAAGTTTAAGCTTAGCTAACTCAGATTTGCCTGCTCCCACTTTGGATCTTAGTGGTCTTATCTCTGCTTTCTCCAAAAAAGGTTTATCAACTACTGAAATGGTTGCTCTTTCAGGGGGGCATACAATTGGGCAAGCAAGATGCACAAGCTTTAGAACAAGGATATACAGTGAGACAAACATAGATCCCAATTTTGCAAAATCATTGCAAGGAAATTGTCCTAATACCACAGGCAATGGTGACAACAACTTGGCCCCAATTGACACAACTAGTCCAACAAGATTTGACAATGCTTACTACAAGAACTTGCAAGTGAAAAAGGGTCTCTTCCACTCTGATCAACAACTCTTCAATGGAGGATCCACAGATTCTCAAGTGAATGGTTATGCCTCCAACCCTTCAATTTTCTGCACTGATTTTGCCAATGCTATGATTAAGATGGGTAACATTACTCCACTCACTGGAACCAGTGGCCAAATTAGGACCAATTGCAGGAAGACCAATTAG 924 0.4102 MMMSLIGLGSSQLSSNFYATKCPNALSTIKSGVNSAVSKEARMGASLLRLHFHDCFVQGCDASVLLDDTANFTGEKTARPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGPSWAVQLGRRDSTTASLSLANSDLPAPTLDLSGLISAFSKKGLSTTEMVALSGGHTIGQARCTSFRTRIYSETNIDPNFAKSLQGNCPNTTGNGDNNLAPIDTTSPTRFDNAYYKNLQVKKGLFHSDQQLFNGGSTDSQVNGYASNPSIFCTDFANAMIKMGNITPLTGTSGQIRTNCRKTN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92041g00001 307 CDD secretory_peroxidase 12 306 IPR033905 GO:0004601|GO:0042744
Stsc92041g00001 307 FunFam Peroxidase 16 157 - -
Stsc92041g00001 307 Pfam Peroxidase 31 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc92041g00001 307 Gene3D - 16 304 - -
Stsc92041g00001 307 PANTHER PEROXIDASE 72-RELATED 10 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92041g00001 307 Gene3D Peroxidase, domain 2 150 286 - -
Stsc92041g00001 307 PRINTS Plant peroxidase signature 281 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92041g00001 307 PRINTS Plant peroxidase signature 171 183 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92041g00001 307 PRINTS Plant peroxidase signature 22 41 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92041g00001 307 PRINTS Plant peroxidase signature 225 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92041g00001 307 PRINTS Plant peroxidase signature 124 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92041g00001 307 PRINTS Plant peroxidase signature 105 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92041g00001 307 PRINTS Plant peroxidase signature 241 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92041g00001 307 PRINTS Plant peroxidase signature 46 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92041g00001 307 PRINTS Plant peroxidase signature 86 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc92041g00001 307 ProSiteProfiles Plant heme peroxidase family profile. 12 307 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc92041g00001 307 SUPERFAMILY Heme-dependent peroxidases 12 307 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc92041g00001 307 PRINTS Haem peroxidase superfamily signature 106 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc92041g00001 307 PRINTS Haem peroxidase superfamily signature 124 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc92041g00001 307 PRINTS Haem peroxidase superfamily signature 44 58 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc92041g00001 307 PRINTS Haem peroxidase superfamily signature 172 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc92041g00001 307 PRINTS Haem peroxidase superfamily signature 227 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc92041g00001 307 FunFam Peroxidase 150 286 - -
Stsc92041g00001 307 ProSitePatterns Peroxidases active site signature. 44 55 IPR019794 GO:0004601
Stsc92041g00001 307 ProSitePatterns Peroxidases proximal heme-ligand signature. 172 182 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92041g00001 Stsc-Chr92041 1286 4319 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92041g00001 11 307 Peroxidase AT5G05340 66.667 9.69e-149 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92041g00001 K00430 - tcc:18602263 490.345