Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92037g00003 ATGGCGCCCGAATACGCTATGTATGGACATTTTTCAGTTAAATCAGATGTCTTTAGCTTTGGTGTCTTAGTTCTTGAAATCGTGAGCGGCCAAAAACACAATTGCACACGCCACTGCGGAGATACTTTAGAGGAGTTACCCCTAAGCTTTGCATGGAGAAATTGGATGGAGGGGAGAGGTGCAAACATTATAGATCCATCACTAAGCAACAGTAATGCAGAAAATGAAATACTGAGATGCATTCACATTGGTTTATTGTGTGTTCAAGAGAATTTAGTTGAGAGACCAACCATGGCTTCCATTGTATTGATGCTTAATAGTCCATCTTTGAGTCTTCCAGTACCTACGGAACCTGCATTTTTTGCGGGAGGCAGAGCCAAAACCCCTCGAGGTGGAGGAGAGAAACAGTCAGAGGAGTATATTTTAAAGGGAACAAATGAATCAACAGGCATATCAGTTCAAGAGTTTACCATTACTAAGCTATATGCTCGCTAG 495 0.4182 MAPEYAMYGHFSVKSDVFSFGVLVLEIVSGQKHNCTRHCGDTLEELPLSFAWRNWMEGRGANIIDPSLSNSNAENEILRCIHIGLLCVQENLVERPTMASIVLMLNSPSLSLPVPTEPAFFAGGRAKTPRGGGEKQSEEYILKGTNESTGISVQEFTITKLYAR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92037g00003 164 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 160 - -
Stsc92037g00003 164 Gene3D Transferase(Phosphotransferase) domain 1 1 111 - -
Stsc92037g00003 164 SUPERFAMILY Protein kinase-like (PK-like) 1 121 IPR011009 -
Stsc92037g00003 164 Pfam Protein tyrosine and serine/threonine kinase 1 103 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92037g00003 Stsc-Chr92037 11299 12095 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92037g00003 1 120 Receptor kinase-like Gene Family AT4G21410 60.000 3.80e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc92037g00003 PK_Tyr_Ser-Thr 3.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92037g00003 - - vra:106771832 189.119