Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92026g00003 ATGTCGAATGGAAAAGAGAAAAATAAACTAAAGGCTAAGAAAACTGAAGCTGACGAACAAGAATGTGTTGTGAGTGGCAATGTGGAGGATATTACAACAAAAAATAGTTCCACTCCAAATAGCTATAGGATGTCTTCTTGGAAAAAGCTTCCACCAGCTATTGACAAAATAAAGCACAAGGATGAAGATGATGGAGATTTACCCTCAAAAGGTGATTCGGATCAGTCGCTAGTCAAAGAACATAATTCTGAAAATTTGGATGCTATGTCATGTCAACCTGAACATTCTGTGTCATCATCAAGGACACGGAAACCTTCTTGGGGATTCTGGGGAGATCAACAAAATTTATCATATGAAGATTCAATGATCTGCAGAATTTGTGAGGTTGAAATACCAATTGTACATGTGGAGGAGCATTCTCGAATATGCACAATTGTTGATAGATGTGATTTGAAAGGCTTAACTGTAAATGAACGGCTTGAAAGAGTTTCTGAAACTATTGAAAAGATATTGGAATCCTGGACACCTAAAAGCACCCAAAGTACCGAAATTCCAGGAGACAGTTTTGAGGTTTCTAGAATGTCCACATCAAGTGTGCATGAAGAGTTCAGTGAGATATCTCTAGAAAGAAATAACATCTCTTCTAGATGCTCTGAAGACATGCTTGACTCTACTACAGAAACTGACAATACATTTGTTATAGACGATGTGAACCTCCCATCCGAAATATCGTGTGAACCGCATATCTACTTAAAATCTGATCATGGGACAAAAATATCTTCAACTGGAAGCTTGACACCAAGATCCCCTTTGATAACACCACGAACCAATCAGATAGAAGTTTTATTAAGTGGAAGAGTAGCAATATCTGAATATGAGAGTTACGACCAGATTAATAAGCTGGTGGAAATAGCTCGTTCTGTTGCAAATGTGAATGCCTGTGACTACAGTTCTTTGGAGATTATGCTTGATCGCTTAGAAGACCTGAAATATGCAATTCAAGACAGAAAAGTGGATGGACTTATTCTGGAGACTTTTGGACGACGCATAGAGAAACTTTTACAGGAGAAATATATATCTCTTTGTGGGCAGATAGAAGATGAAAAGGTAGACTCGTCAAATAACATGGCTGATGAAGAGAGTTCAGTGGAAGACGATGCTGTACGTAGCCTCCGTGCTAGTCCAATTAATCCTTGTTCCAAGGACCGGACGTCTATAGAAGACTTTGAAATAATAAAGCCAATAAGTAGGGGTGCATTTGGACGAGTTTTTCTTGCGCGGAAAAGGGCAACTGGTGATTTATTTGCTATAAAGGTTTTGAAAAAGGCAGATATGATACGTAAAAATGCAGTTCAAAGTATTTTGGCTGAGCGAGACATCCTCATATCCGTTCGAAATCCTTTTGTGGTCCGATTTTTCTACTCTTTCACATGTAGAGAAAATCTCTATCTAGTTATGGAGTATTTGAATGGTGGAGATCTGTATTCTTTGTTAAGAAATCTAGGTTGCTTAGACGAAGATATGGCTCGTGTCTATATTGCAGAAGTTGTTCTGGCGTTGGAGTATTTGCATACCTTAAATGTGATTCACAGAGACTTGAAGCCAGATAACTTGTTGATTGGTCAAGATGGTCATATTAAGGACAGATTGGATGAAGCACAATCAAGTCCCACTTAA 1677 0.3834 MSNGKEKNKLKAKKTEADEQECVVSGNVEDITTKNSSTPNSYRMSSWKKLPPAIDKIKHKDEDDGDLPSKGDSDQSLVKEHNSENLDAMSCQPEHSVSSSRTRKPSWGFWGDQQNLSYEDSMICRICEVEIPIVHVEEHSRICTIVDRCDLKGLTVNERLERVSETIEKILESWTPKSTQSTEIPGDSFEVSRMSTSSVHEEFSEISLERNNISSRCSEDMLDSTTETDNTFVIDDVNLPSEISCEPHIYLKSDHGTKISSTGSLTPRSPLITPRTNQIEVLLSGRVAISEYESYDQINKLVEIARSVANVNACDYSSLEIMLDRLEDLKYAIQDRKVDGLILETFGRRIEKLLQEKYISLCGQIEDEKVDSSNNMADEESSVEDDAVRSLRASPINPCSKDRTSIEDFEIIKPISRGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVQSILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAEVVLALEYLHTLNVIHRDLKPDNLLIGQDGHIKDRLDEAQSSPT 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92026g00003 558 MobiDBLite consensus disorder prediction 1 20 - -
Stsc92026g00003 558 SMART serkin_6 409 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc92026g00003 558 Pfam Protein kinase domain 409 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc92026g00003 558 CDD STKc_MAST_like 415 547 - -
Stsc92026g00003 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Stsc92026g00003 558 MobiDBLite consensus disorder prediction 1 104 - -
Stsc92026g00003 558 Gene3D Phosphorylase Kinase; domain 1 407 492 - -
Stsc92026g00003 558 MobiDBLite consensus disorder prediction 82 104 - -
Stsc92026g00003 558 FunFam probable serine/threonine protein kinase IREH1 407 496 - -
Stsc92026g00003 558 Gene3D Transferase(Phosphotransferase) domain 1 493 547 - -
Stsc92026g00003 558 PANTHER SERINE/THREONINE-PROTEIN KINASE 166 547 - -
Stsc92026g00003 558 ProSiteProfiles Protein kinase domain profile. 409 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc92026g00003 558 SUPERFAMILY Protein kinase-like (PK-like) 394 547 IPR011009 -
Stsc92026g00003 558 MobiDBLite consensus disorder prediction 26 45 - -
Stsc92026g00003 558 MobiDBLite consensus disorder prediction 52 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92026g00003 Stsc-Chr92026 11256 13821 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92026g00003 6 547 AGC Kinase Gene Family AT5G62310 64.899 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Stsc92026g00003 Pkinase 3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92026g00003 - - aip:107632565 980.704