Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92024g00001 ATGTGGTTGACAAAGAATCATTGGGAAAAGAAGCTGGATGGAGTGAATGGAGTGGTGGGAGTAGCAATAGACACAGGTAAGGGCAGCAGAAGTGCACTTCAATGGGCCACTGAACATCTCCTCACAAAAGGTCAAACAGTTGTTCTTATTCATGTCAAGCTTAAGCCAACTACTCTTTCCACATCACATTCTCTTTTGTCTCCAAAAATAGGAATATTTGGCATTGGTGATGGCAAGGCATCAGGAACAAAGGGCCTTGAAGACCCAGGCAAAGACATTTTTCATTCATATCGTCTCTTCTGTGCACGCAAAGATATACGATGCAAGGACATACTCCTAGACGATGTAGATGTATCCAAAGCATTAATTGAATATGCTTCTCAATCAATAATAGAGCATTTGGTTTTAGGCTCTTCAAGCAAATCTACTTTCCTTAGATTCAAGGTAGCAGATATTCCGGGATTGGTATCTAAAGGGGCACCAGATTTCTGTACAGTATATGTGGTTTCAAAAGGAAAGATTCAATCAACAAGATCACCTTCTCGTGCTGCTCCTTTCCTTTCTCCATTGCTTACCCAATCCACCAATCTCTATTCAGACCCACGTTTGCCACTTGCCAATGCTGCCAAAGGCCTTGAAAGGCAATCATTTGATGGACCACGTAGATCACAAGACACAATAAGGTCGCCATTAACTCGGAAAGGAGTGAGTGAGAGATCATATACCGAAATATCATTGCCAGATTCAGACATTACATTTGTAAGTTCTGGAAGATCAAGCTTAGACAGGATGATTCCGTCGTTATACCTCGGATCGTCGGATCTCGGAATGTCGAATCCTCGGCTATCATATGGCTCTGCTGTATCCGGCTGCTCTGATATCATCAACATAGACAGTGGAAACTGCAGCTTTGAAACAATTCATCATCATCATTATCCAAGGATGTCTATGGATAGTCATGGCTCTCCTGAATTCTCATATATATCACATGATAGTGATGGGGTTTTATCTTCTTACTCCAATCCCGCGGATGATGTAGAGATTGAAATGAGGAGACTGAAGTTGGAGTTGAAACAAACAATGGAAATGTACAGCACAGCATGTAAAGAAGCTCTCACAGCAAAACAGAAGGCTATAGAACTTCAACGTTGGAAGCTAGAAGAAGAGAGGAAACTAGAGGAGGCAAGGCTTGGAGAAGAAGCTGCATTAGCAATTGTAGAAACGGAGAAAGCAAAATCAAAAGCAGCTCTTGAGGCAGCTGATGCACAAAAGAGGATTGCAGAACTAGAAGCACACAAAAGACTTAATGCTGAGATGAAAGCAATTAGAGAAGCTGAAGCTAAGAAGAGAGCACTTGATGCTCTTGCACAAAATGACTTGAGGTGTAGAAAGTACTCAATTGAGGAAATTGAAGAAGCAACTAACCATTTTGCAAACTCCATGAAGATCGGAGAAGGCGGTTATGGTCCCGTTTTTAAGTGCCTTCTTGATCATACACCTGTTGCTGTCAAGGTTCTACGCCCTGATGCAGCACAAGGAAGGTCCCAGTTTCAAAGAGAGGTTGAGGTACTGAGTTGCATCCGGCATCCAAACATGGTACTTCTCCTAGGAGCATGTCCGGAATACGGATGCCTTGTTTACGAGTACTTGGCTAATGGAAGTTTAGACGATCGCCTCTTTTGTAGAGGAAACACTCCCCCACTTCCTTGGCAAATAAGGTTTAAAATAGCAGCTGAAATCGGCACCGGCTTGTTATTCCTCCACCAAACAAAACCAGAGCCTCTTGTCCATAGAGATTTGAAGCCAGCTAATATCTTGCTTGACCGAAACTGCGTTGCCAAGATCAGCGACGTAGGCCTTGCTAGGCTAGTCCCTCCGTCGGTGGCTGACTCGGTCACACAATACCATATGACATCTGCTGCCGGAACATTTTGCTATATAGACCCTGAGTACCAGCAAACAGGAATGCTAGGTGTAAAATCTGATCTATACTCCCTTGGGGTTATTTTTTTGCAAATTTTGACGGCGAAACCCCCAATGGGATTAACTCATCATGTTGAGAGAGCTATTGAGAAGGGAACATTCGCTGATATGCTTGATCCTAATGTGTCTGATTGGCCAATGGAGGAGGTCTTGAGCCTCGCGAAAATTTCGATCCAATGTGCCGAGCTAAGGCGAAAAGATAGACCGGATCTCGGCAAGGAAGTCCTACCAATACTAGATAGCCTAAGGACACTCGCTGAAAATGGTGATCAACATTTCAATGGCTATGTTAGCCCATCCAACCAGAGCCAAGTTTCTATTCAGTTGGATGGAGCCTCTTCTCCACTTGATTATTCTGGGGAGAGCCCAAGGAAGTCATCCATTTCAACCCCTTAG 2379 0.4367 MWLTKNHWEKKLDGVNGVVGVAIDTGKGSRSALQWATEHLLTKGQTVVLIHVKLKPTTLSTSHSLLSPKIGIFGIGDGKASGTKGLEDPGKDIFHSYRLFCARKDIRCKDILLDDVDVSKALIEYASQSIIEHLVLGSSSKSTFLRFKVADIPGLVSKGAPDFCTVYVVSKGKIQSTRSPSRAAPFLSPLLTQSTNLYSDPRLPLANAAKGLERQSFDGPRRSQDTIRSPLTRKGVSERSYTEISLPDSDITFVSSGRSSLDRMIPSLYLGSSDLGMSNPRLSYGSAVSGCSDIINIDSGNCSFETIHHHHYPRMSMDSHGSPEFSYISHDSDGVLSSYSNPADDVEIEMRRLKLELKQTMEMYSTACKEALTAKQKAIELQRWKLEEERKLEEARLGEEAALAIVETEKAKSKAALEAADAQKRIAELEAHKRLNAEMKAIREAEAKKRALDALAQNDLRCRKYSIEEIEEATNHFANSMKIGEGGYGPVFKCLLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYLANGSLDDRLFCRGNTPPLPWQIRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNCVAKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLGVKSDLYSLGVIFLQILTAKPPMGLTHHVERAIEKGTFADMLDPNVSDWPMEEVLSLAKISIQCAELRRKDRPDLGKEVLPILDSLRTLAENGDQHFNGYVSPSNQSQVSIQLDGASSPLDYSGESPRKSSISTP 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92024g00001 792 FunFam U-box domain-containing protein 51 550 750 - -
Stsc92024g00001 792 Pfam Protein kinase domain 479 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc92024g00001 792 ProSiteProfiles Protein kinase domain profile. 477 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc92024g00001 792 Coils Coil 343 363 - -
Stsc92024g00001 792 MobiDBLite consensus disorder prediction 211 234 - -
Stsc92024g00001 792 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 168 - -
Stsc92024g00001 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 595 607 IPR008271 GO:0004672|GO:0006468
Stsc92024g00001 792 Gene3D Transferase(Phosphotransferase) domain 1 550 759 - -
Stsc92024g00001 792 Coils Coil 435 455 - -
Stsc92024g00001 792 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 450 549 - -
Stsc92024g00001 792 Gene3D Phosphorylase Kinase; domain 1 456 549 - -
Stsc92024g00001 792 Gene3D HUPs 19 170 IPR014729 -
Stsc92024g00001 792 PANTHER OS02G0152300 PROTEIN 19 765 - -
Stsc92024g00001 792 SUPERFAMILY Protein kinase-like (PK-like) 461 732 IPR011009 -
Stsc92024g00001 792 MobiDBLite consensus disorder prediction 758 792 - -
Stsc92024g00001 792 SMART serkin_6 477 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc92024g00001 792 Coils Coil 405 432 - -
Stsc92024g00001 792 CDD STK_N 18 172 - -
Stsc92024g00001 792 Coils Coil 369 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92024g00001 Stsc-Chr92024 1885 10263 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92024g00001 1 768 Receptor kinase-like Gene Family AT1G78940 55.400 0.0 755
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Stsc92024g00001 Pkinase 6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92024g00001 - - gmx:100779981 1013.45