Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92010g00003 ATGGCGGAAGTGAAAAAGTTAGTTTATCTCCATGGTGCATTGTGTGAAACTTTAAGGCTTTTTCCACCAATACCTCTTGAGCGCAAGCAACCGATCAAAGCTGACATACTTCCAAGTGGACATCTTGTGGATTCGAGTACGAATATCATATTTTTTTTCTATGCAATGGGGAAATCTGAAGAGATATGGGGAAAAGATTGTTTGGAATTTAAACCGGAAAGATGGATATCTGAAAAAGGAGAAATTGTTCATATTCCTTCTTACAAGTTCATTAGTTTTAATGCAGGATCAAGGACTTGTTTGGGTAAGGACATGTCATTTATCCAAATGAAGATGGTAACATCTGCTATTTTACGCTACTATTGTGTAGAAATGATGGAAGATCATCCTCAAGTTATCCCAAGCCTTTCAATTACGCTTCTTATGAAGAATGGATTGAAGGTCAAGATAACAAGAAGAGAAAACATTGATTGA 474 0.3629 MAEVKKLVYLHGALCETLRLFPPIPLERKQPIKADILPSGHLVDSSTNIIFFFYAMGKSEEIWGKDCLEFKPERWISEKGEIVHIPSYKFISFNAGSRTCLGKDMSFIQMKMVTSAILRYYCVEMMEDHPQVIPSLSITLLMKNGLKVKITRRENID 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92010g00003 157 SUPERFAMILY Cytochrome P450 2 153 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92010g00003 157 Pfam Cytochrome P450 1 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92010g00003 157 Gene3D Cytochrome P450 1 156 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92010g00003 157 PANTHER CYTOCHROME P450 2 148 - -
Stsc92010g00003 157 PRINTS E-class P450 group IV signature 7 23 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92010g00003 157 PRINTS E-class P450 group IV signature 84 100 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92010g00003 157 PRINTS E-class P450 group IV signature 100 118 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92010g00003 157 PRINTS E-class P450 group IV signature 58 76 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92010g00003 157 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 93 102 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92010g00003 Stsc-Chr92010 9435 9908 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92010g00003 3 156 Cytochrome P450 AT2G23180 54.545 6.45e-61 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92010g00003 - - ahf:112803756 281.952