Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92010g00002 ATGTTATTTTTCTATGGAGCAACAATTGCATCAATAATCATAACAATCCTCATAGTCTTTTATGTTCGTGGTCGCAAAAGATGTTGTAGAACCCCTCTTTTCATAGATTGGCCACTCTTTGGCATGTCACCACAACTCCTTTGCAACTTGTCCCAATTTCATGAGTTCTTAGCAAATATCTTGAATAGTAAAGGAGGCACTGCTCAATTCATGGGACCTTGGTTCTCCAACATGAACTTCTTGCTCACCACTGATTCCATGAATGCTCATCACGTTTTCAGCAAGAATTATGAAAACTATGTCAAGGGACCCGAGTTTCGCGAGGTTTTCGATGTCTTCGGGGATGCGATTATCGTAACGGATGATCCCGAGAAATGGAAATACTTCAAGTCTTTTTTCCTTTCTCTTATCAAACACAAAGGTTTTGATATCTTCTTCGAGAAAACGATTCAGAGCAAGGTGCACGATGGTTTGCTTCCCATGTTAGATCATGCATGGTTGCAAGGATCAGTGTTGGATCTTCAAGATGTGTTTTGTAGATACACGTTTGATAACATAAGCTCCTTGGTGTTTGGGTTTGATCCCAAATCCCTTTCACTTGGATTTCCAATTATCGAAGCTCAAAAGGCTTTCGATGAGATCGAAAAGTGCTTATTCTATAGACAAATGGTGCCGAAAGCTCTTTGGAAGTTTCAAAAATGGCTTCAAGTTGGTAAAGAGAAGAAGATGGCGAAAGCACGCAAGGTTTTCGACGATTTCCTTTGTACTCAAATAGCTTCTAAGCTTGAAGAACTAAGCAGATTCAAGAAGACTAACGATGAAGCTCTTCCATTCGAAAGCTTTCTTGCTGAAGCTACAAGATACGAATCGTGTGACGTAAAATTTTTAAGAGACTCAGGATTCAATATTTTTGCAGCCGGAAGAGATACTATTGCTTCACTTCTAACATGGTTTTTTTGGCTTGTTGCTACACACCCATTAGTAGAAGCTAAGATTCTCAAAGAAATAAAAGAAATTTTTGGCGCCAGTAACGGAGAATACTACAAAGTGTTAGGCATCGAAGATGTGAAGAAGCTAGTTTATCTCCACGGTGCTTTGTGTGAAGTTCTAAGGCTTTTTCCTCCTATACCTTTAGAGCGCAAGAAACCAATCAAAGATGACATACTTCCAAGTGGACATACTGTGAATTCGAATTCGAATATTGTGTTTTCTTTTTACGGAATGGGAAGATCTGAAGAAATTTGGGGGAAGGATTGCTTGAAATTTAAGCCAGAAAGATGGATATCTGGAAAAGGAAGAATTATTCATGTTCCTTCTTACAAGTTCATAAGTTTTAATGCAGGAGCAAGGACTTGCTTGGGTAAAGATATGTCTTTCATTCAAACGAAGATTGTCATATCTGCTATTTTACAAAAGTATAGCATGCAAGTTGTGAAAGATTGTTCTGAAGTTACACCGAGCCTTTCAATAATTCTTCTTATGAAGCATGGTTTGAAGGTCAAGATAAGAAAAAGAGAAGTTTGA 1524 0.3825 MLFFYGATIASIIITILIVFYVRGRKRCCRTPLFIDWPLFGMSPQLLCNLSQFHEFLANILNSKGGTAQFMGPWFSNMNFLLTTDSMNAHHVFSKNYENYVKGPEFREVFDVFGDAIIVTDDPEKWKYFKSFFLSLIKHKGFDIFFEKTIQSKVHDGLLPMLDHAWLQGSVLDLQDVFCRYTFDNISSLVFGFDPKSLSLGFPIIEAQKAFDEIEKCLFYRQMVPKALWKFQKWLQVGKEKKMAKARKVFDDFLCTQIASKLEELSRFKKTNDEALPFESFLAEATRYESCDVKFLRDSGFNIFAAGRDTIASLLTWFFWLVATHPLVEAKILKEIKEIFGASNGEYYKVLGIEDVKKLVYLHGALCEVLRLFPPIPLERKKPIKDDILPSGHTVNSNSNIVFSFYGMGRSEEIWGKDCLKFKPERWISGKGRIIHVPSYKFISFNAGARTCLGKDMSFIQTKIVISAILQKYSMQVVKDCSEVTPSLSIILLMKHGLKVKIRKREV 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92010g00002 507 Pfam Cytochrome P450 37 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92010g00002 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Stsc92010g00002 507 Gene3D Cytochrome P450 23 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92010g00002 507 SUPERFAMILY Cytochrome P450 36 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92010g00002 507 CDD CYP86A 70 498 - -
Stsc92010g00002 507 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92010g00002 507 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92010g00002 507 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92010g00002 507 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92010g00002 507 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92010g00002 507 PANTHER CYTOCHROME P450 26 500 - -
Stsc92010g00002 507 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92010g00002 507 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92010g00002 507 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc92010g00002 507 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92010g00002 Stsc-Chr92010 3986 5509 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92010g00002 36 505 Cytochrome P450 AT4G39500 44.885 1.07e-144 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92010g00002 - - adu:107489915 671.389