Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc92006g00001 ATGTGGATGATAAGGCAAACACCAGAAGGAAAGCCTGTTAGAGAATCATACATAATCATGATTTTCTTAATGTTGTTGTTGTGTTCATTGTTTAGTGAGCTTATTGGGCAGCATTTTATTATTGGGCCTATTTTTTTGGGCCTTGCTGTTCCTGATGGGCCACCTTTGGGCTCAGCGTTGAGTGAGAAGCTGGATGCTTTGGTTTCAGCTGTGTTCTTGCCGTTGTATTTTCTTTTCAGTGGGGCAAGGTTCAATTCCTTTGTACTCGAGGCAACGAGCTTTTGGATTGTGCAGGTTTTGGCTATAAGTAGCTTCTTTGGAAAGGTTTTGGGAGCAATGTTGCCTTCTCTTTATTGCAAGATGTCTTTGACTGACTCTCTTTCCTTAGGTCTTATCATGAGTGCACAAGGCATCACTCAGTTGCTCTACTTACAAAGCTCTTTATACCTCAACATTATAGATACACAATCATATGGGAATGTGGTGATATCAATCCTATGGTTAACGGGAGCAGCCTTACCTCTTGTGAAATTCCTATATGACCCTTCGAAGAGGTACTTAGCCTTAAACCGAAGAAGAACCATTGAACATGCATCTCCAGACATTGAGTTTCTCCTCATGGCATGTCTACACAACGAAGAAAACACACCTTCCATGATCACCATTCTTGACATGTCAAACCCATCAGAACAAAGACCTATTTGCTTCTATGTTCTTCATCTCATTCAATTAACCGGAAGAGCAACACCTCTCTTCATCGACCACCAATCTAGTAGCAACAAACCCAGTTCCATATACCCTACCCATTCTCAACGCATGATCAATGCCTTTAGATCTTACGAGCAGCAGAATCAAGGCAAACTTGTTGTGAATCTCTTCACATCAATCTCGCCTTATGAAACAATGCATGACGAGGTTTGCATGCAAGCCGCGGAGCGTAGGGCTTCCTTGCTCATCGTGCCGTTTCACAAGAAATGGAGTTCCAATGGAGTTGTAACAGAATCATCACATTCAATTAGGGCTTTCAACCGTCAATTGCTGAGAACTGCACCTTGTTCGGTTGCCATTCTCGTCGAGCGCGGAACGTTGAGCAGGAACAATCCTTTAACATCTGCTCCCTTCTACAGTGTCGTAGTAGTGTTCATCGAAGGCTCTGACGATCGCGAATCCTTGGTTTATGCAATGCGAATGGCGGATCATCCTAATGTGAGTGTTACAGTGGTTAGGTTAATAGAGCCGAGAAGAAAAAGTATGAACTTGATGATGAGAGATACGGATGGGGATTTGATTCATAGGTTTAAGGTAGAGTACTGCATTCAGATAAAAAGACATGATTATAGAGAAGAAGTGGTTAAGGATAGTGTTGAGATGATTAATGTGTTAAAGTCTTTTGATGGTTGTTTTGATTTGATTATGGTAGGTAGGCGCCATGCGAATCGTGAATTTTCATCATTGTTTAATGGGATGAATGAGTGGAATGAGTATCCAGAACTTGGTGTTGTAGGGGACATGCTTGTTTCTTCGGATACTACTTATGATGGTTCTGTCATGGTTGTTCAACAACAGATTTTAGGGTCTCATGGTGGTGGCGGCGGTGGTTGCTATGGTGGTGGTAGCGGTGGCGGCCACCATGGTGGTTATCATCATCCTGATTTTCATCCTGATTTCCATCATCCTAGACAAGAAAGACGCCTTAACATTCCGGAAGTGCCACGAGATACAAGGGTGTGGCCAATGGTTTAA 1743 0.4274 MWMIRQTPEGKPVRESYIIMIFLMLLLCSLFSELIGQHFIIGPIFLGLAVPDGPPLGSALSEKLDALVSAVFLPLYFLFSGARFNSFVLEATSFWIVQVLAISSFFGKVLGAMLPSLYCKMSLTDSLSLGLIMSAQGITQLLYLQSSLYLNIIDTQSYGNVVISILWLTGAALPLVKFLYDPSKRYLALNRRRTIEHASPDIEFLLMACLHNEENTPSMITILDMSNPSEQRPICFYVLHLIQLTGRATPLFIDHQSSSNKPSSIYPTHSQRMINAFRSYEQQNQGKLVVNLFTSISPYETMHDEVCMQAAERRASLLIVPFHKKWSSNGVVTESSHSIRAFNRQLLRTAPCSVAILVERGTLSRNNPLTSAPFYSVVVVFIEGSDDRESLVYAMRMADHPNVSVTVVRLIEPRRKSMNLMMRDTDGDLIHRFKVEYCIQIKRHDYREEVVKDSVEMINVLKSFDGCFDLIMVGRRHANREFSSLFNGMNEWNEYPELGVVGDMLVSSDTTYDGSVMVVQQQILGSHGGGGGGCYGGGSGGGHHGGYHHPDFHPDFHHPRQERRLNIPEVPRDTRVWPMV 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc92006g00001 580 Gene3D - 240 489 - -
Stsc92006g00001 580 Gene3D - 1 187 IPR038770 -
Stsc92006g00001 580 PANTHER CATION/H + ANTIPORTER 1 522 - -
Stsc92006g00001 580 Pfam Sodium/hydrogen exchanger family 12 167 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc92006g00001 Stsc-Chr92006 3502 5634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc92006g00001 2 523 Antiporter Super Family AT2G13620 34.807 9.33e-113 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc92006g00001 K26731 - mtr:11413669 694.886