Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91g00004 ATGGCTGAGATTAGCACCCTTTGTGGGATTGAATCTTGTGCTATCATTTACCCTGAGAATGAACCTGAGCCAGAGGTTTGGCCATCACCAGAGAAGGCCAAAGAAGTCATTTCCAAGTTCAAGGAAAAGCCCAGACTGGAACAAAACAAGAGAATGCTAAATCAAGAAACTTTGTTGAAGAAAAGAATCCAAAAGGCCGAAGACCAGCTAAAGAAACAGAGGGATGAGAATAGGCAAAAAGAGATGAGCAATCTCATGTTCAAATTCTTGAGCACCGGTGGAATCTCTGACAATAATGTTAGCTTGATTGATCTTAGTGATCTCTCAAGGCTAATTGATCAGACTCTAAAGGAAATTAATCTGAAGATTGAAAAGACTCAAAACCAAGATCAAGTGGAAGAAACACAAACCAAACATTGA 420 0.3952 MAEISTLCGIESCAIIYPENEPEPEVWPSPEKAKEVISKFKEKPRLEQNKRMLNQETLLKKRIQKAEDQLKKQRDENRQKEMSNLMFKFLSTGGISDNNVSLIDLSDLSRLIDQTLKEINLKIEKTQNQDQVEETQTKH 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91g00004 139 Coils Coil 49 83 - -
Stsc91g00004 139 SUPERFAMILY SRF-like 2 64 IPR036879 GO:0003677|GO:0046983
Stsc91g00004 139 Gene3D - 1 64 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91g00004 Stsc-Chr91 46831 47250 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91g00004 3 128 Type I MADS-box Gene Family AT5G48670 43.651 8.80e-35 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91g00004 - - gmx:100816084 152.14