Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91982g00001 ATGGGAAAGAATATGGGTGTGAAAGAATCTGAATTGGCAAGTGCAAGTAGTGTTAGTAGTCATGAGCAATCTCATCCTGGAAAAGTTTGGGGAATTCTTCATGTGATAAAGTATCATAATTGGCGCCATGTGAAAAGAAAGCATTCACACAAAAAACATGATGATCCACCACATGAAGAACCTCCTAGAGAAGAAATTCCAGTGACTTTAGATGAAAAGCCTGAACCTCATGGGCCAAGTAGTACAAGATCTTCGTCTAGTGTTGAACATAAGTTAAAGTCTTCTCCAGGAAGCAAACATTCCATCAAATCTCGGTTAAAATCGCTCATTCAAGACGAATTATACAGAAAGAAGGGTGAACATAAGAGAAGCTCAACATGCCCAGCATCAAAGTCACAACTCATTCGTGCCGATTCGATTCATCACTTGGATATAACAAGCAACAATAATGAAAAATGTGTTGATTGTGGTGCTGAGTTTTCTCATGACAACATGGAAATGAGTAACATTCATAAGCACAAGAGGCATGACAACGACGTGTGTTCTCCTCACAATCATCAAGGTTCTCGAAACCAAAAGATTAAGTCAATGAATGCAAAGATTCTTACAACCGATGCTTCGCCCCATCTCTTCAAGGATTTTCTAGATGCATTGGATCTTATGAGCCAAAACAAGGACTCTATCTTGAAATATATACAGGATCCTGAAGGCTCTACTCTAATGCCGTCTTCTGATGGAGTTCATGATAAAGAAGATTCTAGAAGCAAATCGAAACGGTCGAATTCTGTGTCGTTTCCTCTGCCAGATTCCTCATCCGGAGGAAGTAAGGATTCTAAGAAGAAGCCTTTACAGATGGATGAGAAGGGAGAAAGACAATTATTACAAGCACAAAATAATGTGAGAAAACAATCCATGTGTAAATCATCGGAAACGTCTCCGGAGCATTCGCCACCGGAGGTCCCTAGCAAGGTGAAATCCAAGAGATATTTCTTTGATCTCAGGAAGAAGATCATGCAAATAATAGAAGAGAACAAGAAAGAGAAGCATCGAATCGCAATGGATGCTATAGTGGACAAAATCCCTCAGGGAAATAAGCATTCAAAACTTTCAAAGAAGTATACACATGATCCGTTATTGAAAGATCCCGCCGTTACTGACATTGAAGGGAAAGAATCTAGCACAAAAAGTGGTTATGGCAGGTGTCTCTCTTCTTCTTCCTTTAACAAACGCCCTCAATCTACCGTTAGAACTGCATCTCTGAAAGATTCAGCTGGCAAATATTCTCAGCTGTATGAGACTTGCTTTAACACGGATCAAGCCAATTGTTCTAATAAGGCTACTGAGAATATAAAGTCGAAGGACGACGAGAAAACTTCGGTGTTAACGACGGAGAAAACCTTTCAAAGGTTTCTTTCATTACCACATAACATTGCACCCAACAGTGAAGATTCTTCTGTGTTTCTTTCTTCCCAGAGCTCTTTTAGGCAGCGCAACCGCGAAAGCCTTTTAAGGAGTTTCAAAAAGGCTTGTGATTCAAACAGTGAAGTCTTGCTACAAGCTCTAGAAGACGATGCAATTCAAGAAAGCATATTGAATGCTCTTGAACCAAAGAGAACTCTTGTAAGGAGTGAATCAAGATCAGAAGCAGATGCTAGTGTTAATGTTAGTGATTGTGCTTCTTGCTCTGATGAACTGGTTACTGGACATGGAACAGAATCTACTCAAATGCTGGGAGAATCAAACTCAGTCTTCTCTTGTGACACCAATTTCTTGGAAGACACATTTGAGTTTGATAACTTAAACCTATTGGATGGTGAGCTATTTTTCGACACAGAATTGGATCAGAAAGAGGAAGTTGGGAGAGGAGATAAAACTCAAAAACTAAAAAATCTAAGTAAGAATTCCAACTACTACAAAATCCCATGTGTTGAAGTTGATCCAAGCCATGAATCTGCATTCAATTATGTGAGGAAGGTGTTGGAGCTCTCTGGTCTCACTAGTAGCTCTGATGAATCTCTTGAAATGTGGTATTCAGATAACCAGCCAGTTAATCCTTCAGTGTATGAAGAACTTGAAGGGTGCTTGCTTCTTGATCCTGCTGATTGTTATGGTGATAACAACATTATTGATAAAGGTGATGATGGACATTATTATTGTAACCATTTACTCTTGTTTGATATAGTCAATGAAGGGTTGTTGGAGATATTTGGAAGATCATATAGCTATTATCCTAGATCATTATCTTCACTGTCCCATGTTCATCCATTGCCAGTAGGAGAAGATGTTGTAAGAAAAGTTTGGGCAGTTATTAGTTGGTACCTAAGATCAACATCTGAGCCTTACCCAACATTGGATTACTATGTGAGTAGAGATCTTGCAAAAGATGATGGGTGGATGAATCTCCAATTTGATTCTGAATGTGTGGCCCTTGAGTTAGATGACTTGATCTTTGATGATCTACTAGACGAAATTATCCAAACTTAA 2484 0.3909 MGKNMGVKESELASASSVSSHEQSHPGKVWGILHVIKYHNWRHVKRKHSHKKHDDPPHEEPPREEIPVTLDEKPEPHGPSSTRSSSSVEHKLKSSPGSKHSIKSRLKSLIQDELYRKKGEHKRSSTCPASKSQLIRADSIHHLDITSNNNEKCVDCGAEFSHDNMEMSNIHKHKRHDNDVCSPHNHQGSRNQKIKSMNAKILTTDASPHLFKDFLDALDLMSQNKDSILKYIQDPEGSTLMPSSDGVHDKEDSRSKSKRSNSVSFPLPDSSSGGSKDSKKKPLQMDEKGERQLLQAQNNVRKQSMCKSSETSPEHSPPEVPSKVKSKRYFFDLRKKIMQIIEENKKEKHRIAMDAIVDKIPQGNKHSKLSKKYTHDPLLKDPAVTDIEGKESSTKSGYGRCLSSSSFNKRPQSTVRTASLKDSAGKYSQLYETCFNTDQANCSNKATENIKSKDDEKTSVLTTEKTFQRFLSLPHNIAPNSEDSSVFLSSQSSFRQRNRESLLRSFKKACDSNSEVLLQALEDDAIQESILNALEPKRTLVRSESRSEADASVNVSDCASCSDELVTGHGTESTQMLGESNSVFSCDTNFLEDTFEFDNLNLLDGELFFDTELDQKEEVGRGDKTQKLKNLSKNSNYYKIPCVEVDPSHESAFNYVRKVLELSGLTSSSDESLEMWYSDNQPVNPSVYEELEGCLLLDPADCYGDNNIIDKGDDGHYYCNHLLLFDIVNEGLLEIFGRSYSYYPRSLSSLSHVHPLPVGEDVVRKVWAVISWYLRSTSEPYPTLDYYVSRDLAKDDGWMNLQFDSECVALELDDLIFDDLLDEIIQT 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91982g00001 827 PANTHER PROTEIN TRM32 14 825 IPR044257 -
Stsc91982g00001 827 MobiDBLite consensus disorder prediction 1 26 - -
Stsc91982g00001 827 MobiDBLite consensus disorder prediction 44 105 - -
Stsc91982g00001 827 MobiDBLite consensus disorder prediction 274 288 - -
Stsc91982g00001 827 MobiDBLite consensus disorder prediction 234 323 - -
Stsc91982g00001 827 MobiDBLite consensus disorder prediction 53 78 - -
Stsc91982g00001 827 Pfam Protein of unknown function (DUF3741) 195 235 IPR022212 -
Stsc91982g00001 827 Pfam Domain of unknown function (DUF4378) 653 823 IPR025486 -
Stsc91982g00001 827 MobiDBLite consensus disorder prediction 10 24 - -
Stsc91982g00001 827 MobiDBLite consensus disorder prediction 291 316 - -
Stsc91982g00001 827 MobiDBLite consensus disorder prediction 259 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91982g00001 Stsc-Chr91982 1293 7235 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91982g00001 205 817 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 31.083 7.87e-60 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91982g00001 - - aip:107610961 992.645