Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91953g00002 ATGAAGGATCCAAAACGACACTCGCCTCGGCGTACGTTTCAGCGAGTTGTCGGTGATTCAGACGGAACGATCACGAGTTTCAAGAATGTTCGCCGGAGGAGGCTCAGAGTCCGGCGAATGAAGTACACCTGCGAGACCAAGATCCACGTCGGGAATGGAGATTCTCCGGCGGCGGATGCGGATGTGAAGATCGTTGATTCCGATGGCAAGCGAAGGGAGATTAACGAATCGATGGAAATATCGCTGTCGCTGTCGTCAACGTCGTCTGAGGAGGAGGATCGGCCGTCGGCGGGGGAAAACTGTGACGGAGTTCTGTCGTACGGTTCGGTGTCGGTGATCGGGAACAGGAAGGAGATGGAAGATACGGTGAGCGTGGAGATAGGGTTTGTTGGGAAGGAGAAATCGAAGTGCGACTTCTTCGCGGTGTTTGATGGCCACGGCGGAGCTCAGGTGGCGGAGGTGTGCCGGGAGAGACTGCATCGGCTGGTGGCGGAGGAGGTAGAGAGGAGAATCGAGAAGGATGAGTGGGATTGGAAGGGTGTGATGGAAGGGTGTTTCCGTAAATTGGACGGAGAGGTTGCGGGAAATGCAGCGGTGAGGACGGTGGGTTCTACGGCGGTTTTAGCCATCGTTGCGACGGAGGAAGTCGTCGTCGCAAATTGCGGTGATTGTAGGGCCGTGTTGGGAAGGGGAGGCGAGGCCGTGGATTTGTCTAGTGATCATAAGCCCGACAGGCCTGATGAGTTGATGCGAATCGAAGAGGCTGGTGGAAGGGTCATAAATTGGAATGGCCAGCGCGTTCTAGGTGTTCTTGCCACTTCGCGATCTATAGGAGACCAATACCTTAGGCCTTATGTAATATCAAAACCAGAAGTCACGGTGACAAAGCGAAGCAGCAAAGATGAATTCCTTATACTAGCAAGCGATGGCTTGTGGGATGTGATTTCCAGTGAAGCAGCGTGCCAGCTTGTAAGGCGAAGCCTCCACGGCCAGATTAAGAGAGTTTCCAATGCAGTTGGGAGGCAAAGCCGTGCTACCGAGGCTGCTGCACTCTTAGCTGAGATAGCAATGGCAAAGGGAAGCAGAGATAACACCAGTGTCATTGTTATCGAGCTAAACAGAACATCTTCTTCCACCTGA 1140 0.536 MKDPKRHSPRRTFQRVVGDSDGTITSFKNVRRRRLRVRRMKYTCETKIHVGNGDSPAADADVKIVDSDGKRREINESMEISLSLSSTSSEEEDRPSAGENCDGVLSYGSVSVIGNRKEMEDTVSVEIGFVGKEKSKCDFFAVFDGHGGAQVAEVCRERLHRLVAEEVERRIEKDEWDWKGVMEGCFRKLDGEVAGNAAVRTVGSTAVLAIVATEEVVVANCGDCRAVLGRGGEAVDLSSDHKPDRPDELMRIEEAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRSSKDEFLILASDGLWDVISSEAACQLVRRSLHGQIKRVSNAVGRQSRATEAAALLAEIAMAKGSRDNTSVIVIELNRTSSST 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91953g00002 379 CDD PP2Cc 106 372 IPR001932 -
Stsc91953g00002 379 ProSiteProfiles PPM-type phosphatase domain profile. 106 372 IPR001932 -
Stsc91953g00002 379 ProSitePatterns PPM-type phosphatase domain signature. 139 147 IPR000222 GO:0043169
Stsc91953g00002 379 FunFam Protein phosphatase 2C 51 99 379 - -
Stsc91953g00002 379 Gene3D - 96 378 IPR036457 -
Stsc91953g00002 379 Pfam Protein phosphatase 2C 107 365 IPR001932 -
Stsc91953g00002 379 PANTHER PROTEIN PHOSPHATASE 87 371 IPR015655 GO:0004722|GO:0006470
Stsc91953g00002 379 SMART PP2C_SIG_2 120 372 IPR001932 -
Stsc91953g00002 379 SMART PP2C_4 96 370 IPR001932 -
Stsc91953g00002 379 MobiDBLite consensus disorder prediction 75 102 - -
Stsc91953g00002 379 SUPERFAMILY PP2C-like 104 373 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91953g00002 Stsc-Chr91953 11120 14998 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91953g00002 107 374 PP2C-type Phosphatase Gene Family AT2G29380 50.694 2.75e-88 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91953g00002 K14497 - gmx:100807235 515.383