Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91944g00002 ATGAGCCTGGAGAGGCAAACATCAGGAGAATTCCAATATCCTGACTTTAAAATTGTAGCCATTGATTCCGGCGTTCCTCGCCGACCCCCTGCTGGAAAACGTGCAGATGACCAGGTTAATTATCCTAAGTTGGTTGAGTTGTTATTGCATAGTTCTGAGTTTGCCTCAAACCTTTTATATGATATAACCGGAGGGAAATTAGGATGTTTGCCACCTGAAGACATGGATACACTTGATACACAGGCAAGTGACATCACACCAGTAGTTCATGCATTTCAAACTGGATTTCGGTCTGCTCTTAGAGATTTGCAGGGTTTCCATATATTCCTTCTAACTCTTCACCAAAGACTAGATATCTTGTNNNNNNNNNNTATGAACATTATAGGCAAAATATATTTGGGGGAAGCTGACAAAGAGGATTCCCTGGTTCCTGAGTCACCTTCAATGGTTATTAGCGGTAGCTTTTTCTCCCCAAACAGCAAGGAGAGGTTTTCTAATGATAATCATCAGGATTTTACTGATTCAGAATCTCAGCGATCTGCTCCAAGGGCATCATTTTCGGGAAATAGAGATAGTTGTGACTCTGCTTCAACATCAAGAGAAAGTCGGTATGGAAAGTTGTATAAAGGAAGTGGGGAGCCACATCGCAGTCTCCGCTTAACGACTAAGCTTCGTGACTTCCACAAATTTGCAAAGGTCGATGCTGAATCTAATAAAGAATTGGAGCAGTGGAATGAAATGCTTAAAAGTGATGCCATCAAACTATGCCAGGATAACAACTTCTATACAGGATTTTTTGAGGGCAGTGATAATAACATCGTTGTTGATGCATATGAACTGAAGGTCAGACTTGAGCATATTCTTGAAAGAATTGCATTGATATCTGACGCTGCAAGTACAGAGAAACCATCTGCTGTTACAAGTACTGTGTTCATTGGGGGAGCACTAGCTGCAAGATCTGTTTATACATTGCAATACTTGGGAATCACACATATTATATGCTTGTGTACCAATGAAATTGGACAATCAGATACTCAGTTTCCTGATCTGTTTGAGTACAAAAATTTCTCCGTGTATGACAACGAAGATTGTAACATCAGCAGCATATTTGAAGAATCATGTGATTTTATAGATAATGTTGAACAAAATGGTCAGAAAGTTTTAGTTCATTGCTTTGAAGGGAAAAGCAGAAGTGTGACATTGGTCCTTGCTTACTTAATGCTCAGGAAGAACTTAACTCTATTAGAAGCATGGAATGCTCTGAAACGAGTTCATCGTCGGGCACACCCCAACGATGGTTTCGCAAGGATCTTGCTGAAGCTAGATCAGAAACTGCACGGGAAGGTTTCAATGGAGTGGCAGCAGCGGAAACCAAGCATGAAGGTTTGCCCCATATGTGGGAAGAATGCAGGACTAAGCAGTGGCTCACTGAAGCTGCATCTGCAAAAAGCACATAAGAAGCTATCATCTGGCAGTGTAGATAGTGCCATGTCAATGGAGATCCAAAAGGCATTGACAGCATTGAAGATCAGCCGCGGTGGGAGTGTCAGCCCCACACAAAGGTCAGCTCATTCCACAGATGAGTGA 1587 0.4159 MSLERQTSGEFQYPDFKIVAIDSGVPRRPPAGKRADDQVNYPKLVELLLHSSEFASNLLYDITGGKLGCLPPEDMDTLDTQASDITPVVHAFQTGFRSALRDLQGFHIFLLTLHQRLDILXXXXMNIIGKIYLGEADKEDSLVPESPSMVISGSFFSPNSKERFSNDNHQDFTDSESQRSAPRASFSGNRDSCDSASTSRESRYGKLYKGSGEPHRSLRLTTKLRDFHKFAKVDAESNKELEQWNEMLKSDAIKLCQDNNFYTGFFEGSDNNIVVDAYELKVRLEHILERIALISDAASTEKPSAVTSTVFIGGALAARSVYTLQYLGITHIICLCTNEIGQSDTQFPDLFEYKNFSVYDNEDCNISSIFEESCDFIDNVEQNGQKVLVHCFEGKSRSVTLVLAYLMLRKNLTLLEAWNALKRVHRRAHPNDGFARILLKLDQKLHGKVSMEWQQRKPSMKVCPICGKNAGLSSGSLKLHLQKAHKKLSSGSVDSAMSMEIQKALTALKISRGGSVSPTQRSAHSTDE 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91944g00002 528 ProSiteProfiles Dual specificity protein phosphatase domain profile. 302 447 IPR020422 GO:0006470|GO:0008138
Stsc91944g00002 528 Gene3D Protein tyrosine phosphatase superfamily 279 448 IPR029021 -
Stsc91944g00002 528 Pfam Dual specificity phosphatase, catalytic domain 317 442 IPR000340 GO:0008138|GO:0016311
Stsc91944g00002 528 CDD DSP 303 440 - -
Stsc91944g00002 528 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 302 447 IPR029021 -
Stsc91944g00002 528 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 371 423 IPR000387 GO:0016311|GO:0016791
Stsc91944g00002 528 MobiDBLite consensus disorder prediction 177 198 - -
Stsc91944g00002 528 SMART dsp_5 302 444 IPR020422 GO:0006470|GO:0008138
Stsc91944g00002 528 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 4 526 IPR035010 GO:0004721|GO:0009737|GO:0043622
Stsc91944g00002 528 MobiDBLite consensus disorder prediction 161 198 - -
Stsc91944g00002 528 FunFam Dual specificity protein phosphatase PHS1 274 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91944g00002 Stsc-Chr91944 6773 9400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91944g00002 15 513 Protein tyrosine phosphatase (PTP) family AT5G23720 65.339 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91944g00002 K14165 - gmx:100799468 831.632