Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91944g00001 ATGATTGAGATCAACAAAAAGGAGAAGATATTCAATCTGAAAGGCATAGCTTTGGGTAATCCAGTTCTAGAATATGCCACTGACTTCAATTCAAGGGCCGAGTTTTTTTGGTCTCACGGATTAATATCAGATTCAACTTATGAAATGTTCACCAAAGACTGTAACTATTCTCGGTATGTCAGTGAATACTACAGAGATTCAGTTTCCCCTATATGTTCAAAGGTTATGAGTCAAGTAAGCAAAGAAACAAGCAAATTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATCTCCTCAGTGCTTTCACAGTCCAAAGTTATTTGCCCGCAAACCCAACAAGCAAATGAGACCATCGATGTGTGTGTGGATGACAAAGTTACAAATTATTTGAACAGAAGAGATGTGCAGCAGGTGCTCCATGCCAAGCTTATTGGGGTTCGCAAGTGGGATGTCTGCAGCAATATCCTTGACTATGATATGCTAAACCTGGAAGTGCCTACACTCCCTGTTGTTGGCTCACTCCTAAAAGCTGGAGTTAGAATCTTAATTTACAGCGGTGATCAAGATTCAGTGATTCCACTGACTGGAAGCCGTACATTGGTTCAAAAGCTGTCAAAACAACTCGGACTAAATACAACAGTCCCTTACAGAGTATGGTTTGAAGGTCAACAGGTTGGTGGATGGACTCAAGTTTATGGCAACATTCTCTCATTTGCAACCATCAGAGGAGCCTCCCATGAAGCCCCTTTCTCACAGCCTGAAAGATCACTTGTTTTATTCAAGTCATTCTTGGAAGGCAAGCCTCTACCTGAAATTTTCTGA 825 0.4121 MIEINKKEKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYEMFTKDCNYSRYVSEYYRDSVSPICSKVMSQVSKETSKFVDKYDVTLDVCISSVLSQSKVICPQTQQANETIDVCVDDKVTNYLNRRDVQQVLHAKLIGVRKWDVCSNILDYDMLNLEVPTLPVVGSLLKAGVRILIYSGDQDSVIPLTGSRTLVQKLSKQLGLNTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKSFLEGKPLPEIF 274
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc91944g00001 274 Gene3D - 168 267 - -
Stsc91944g00001 274 Pfam Serine carboxypeptidase 6 267 IPR001563 GO:0004185|GO:0006508
Stsc91944g00001 274 FunFam Carboxypeptidase 168 267 - -
Stsc91944g00001 274 Gene3D alpha/beta hydrolase 1 108 IPR029058 -
Stsc91944g00001 274 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 254 IPR001563 GO:0004185|GO:0006508
Stsc91944g00001 274 Gene3D - 122 158 - -
Stsc91944g00001 274 ProSitePatterns Serine carboxypeptidases, histidine active site. 237 254 IPR033124 GO:0004185
Stsc91944g00001 274 SUPERFAMILY alpha/beta-Hydrolases 9 271 IPR029058 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc91944g00001 Stsc-Chr91944 325 2383 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91944g00001 130 270 Calmodulin-binding Proteins AT2G22960 27.660 2.86e-16 73.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91944g00001 K16297 - gmx:100795668 515.383