Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc91944g00001 | ATGATTGAGATCAACAAAAAGGAGAAGATATTCAATCTGAAAGGCATAGCTTTGGGTAATCCAGTTCTAGAATATGCCACTGACTTCAATTCAAGGGCCGAGTTTTTTTGGTCTCACGGATTAATATCAGATTCAACTTATGAAATGTTCACCAAAGACTGTAACTATTCTCGGTATGTCAGTGAATACTACAGAGATTCAGTTTCCCCTATATGTTCAAAGGTTATGAGTCAAGTAAGCAAAGAAACAAGCAAATTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATCTCCTCAGTGCTTTCACAGTCCAAAGTTATTTGCCCGCAAACCCAACAAGCAAATGAGACCATCGATGTGTGTGTGGATGACAAAGTTACAAATTATTTGAACAGAAGAGATGTGCAGCAGGTGCTCCATGCCAAGCTTATTGGGGTTCGCAAGTGGGATGTCTGCAGCAATATCCTTGACTATGATATGCTAAACCTGGAAGTGCCTACACTCCCTGTTGTTGGCTCACTCCTAAAAGCTGGAGTTAGAATCTTAATTTACAGCGGTGATCAAGATTCAGTGATTCCACTGACTGGAAGCCGTACATTGGTTCAAAAGCTGTCAAAACAACTCGGACTAAATACAACAGTCCCTTACAGAGTATGGTTTGAAGGTCAACAGGTTGGTGGATGGACTCAAGTTTATGGCAACATTCTCTCATTTGCAACCATCAGAGGAGCCTCCCATGAAGCCCCTTTCTCACAGCCTGAAAGATCACTTGTTTTATTCAAGTCATTCTTGGAAGGCAAGCCTCTACCTGAAATTTTCTGA | 825 | 0.4121 | MIEINKKEKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYEMFTKDCNYSRYVSEYYRDSVSPICSKVMSQVSKETSKFVDKYDVTLDVCISSVLSQSKVICPQTQQANETIDVCVDDKVTNYLNRRDVQQVLHAKLIGVRKWDVCSNILDYDMLNLEVPTLPVVGSLLKAGVRILIYSGDQDSVIPLTGSRTLVQKLSKQLGLNTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKSFLEGKPLPEIF | 274 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc91944g00001 | 274 | Gene3D | - | 168 | 267 | - | - | |
Stsc91944g00001 | 274 | Pfam | Serine carboxypeptidase | 6 | 267 | IPR001563 | GO:0004185|GO:0006508 | |
Stsc91944g00001 | 274 | FunFam | Carboxypeptidase | 168 | 267 | - | - | |
Stsc91944g00001 | 274 | Gene3D | alpha/beta hydrolase | 1 | 108 | IPR029058 | - | |
Stsc91944g00001 | 274 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 6 | 254 | IPR001563 | GO:0004185|GO:0006508 | |
Stsc91944g00001 | 274 | Gene3D | - | 122 | 158 | - | - | |
Stsc91944g00001 | 274 | ProSitePatterns | Serine carboxypeptidases, histidine active site. | 237 | 254 | IPR033124 | GO:0004185 | |
Stsc91944g00001 | 274 | SUPERFAMILY | alpha/beta-Hydrolases | 9 | 271 | IPR029058 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc91944g00001 | Stsc-Chr91944 | 325 | 2383 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc91944g00001 | 130 | 270 | Calmodulin-binding Proteins | AT2G22960 | 27.660 | 2.86e-16 | 73.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc91944g00001 | K16297 | - | gmx:100795668 | 515.383 |