Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91930g00001 ATGTGTCTGTTATTAAGAAATCATAAAGTGCTAGAAAAAGCAAAAGAAGAACTTGATAAGAAAATTGAGAAAGAAAGGTGCATAAATGATTCAGATATAAACAAATTAGTATATATTCAAGCTATAGTCAAAGAGACATTAAGATTGTATCCACCAGCTCCCCTTACAACTCGGGAATTCACAGAAAATGCCAATCTAGGAGGATATCATATCGAAAAAGGGACTATACTACTTACAAATGTTTGGAAAATCAACACTAATCCTAGTGTTTGGTCAGATTGGCCAGAGTTCAAGCCAGAAAAATTTCTGACAACTCACAAAGATGTAGATTTTAAGGGTCATCATTTTGATTTGTTACCATTTGGAAGTGGTAGAAGAATGTGCCCTGGAATTTCCTTTGGAGTTCAAATAATTCACTTCATTCTAGCTAGCTTTTTGTATTCTTTTGAAATCTCTTCTATGGAACATGTTGATATGACTGGAACTCTTGGAGCGGTTTATGCTAAAGCTACTCCACTTAAGATTTACTCCCAAAATAACACAGATCATTACGGGTATATAAGGAGAGGATCCATTCCTCTCTCAGGTACGTCTTCTAAACCCAACCACATTGCATGCGTTAGAAGAGCTCCCAAATCCTTATTTGGCGAAGTTCTGCTGGCGCACACCCACCTTTCACATAAACCTCCAACCTTCCGTCTTGGCACCGCCGATTACGCCGGTAGTCCCAAACCCCTCGAAGGTACATTCCTACCATTGGCGCCGTCTGTGGGGACTACCTCAACGTAA 789 0.3942 MCLLLRNHKVLEKAKEELDKKIEKERCINDSDINKLVYIQAIVKETLRLYPPAPLTTREFTENANLGGYHIEKGTILLTNVWKINTNPSVWSDWPEFKPEKFLTTHKDVDFKGHHFDLLPFGSGRRMCPGISFGVQIIHFILASFLYSFEISSMEHVDMTGTLGAVYAKATPLKIYSQNNTDHYGYIRRGSIPLSGTSSKPNHIACVRRAPKSLFGEVLLAHTHLSHKPPTFRLGTADYAGSPKPLEGTFLPLAPSVGTTST 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91930g00001 262 Pfam Cytochrome P450 3 159 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91930g00001 262 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91930g00001 262 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91930g00001 262 PRINTS P450 superfamily signature 119 128 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91930g00001 262 Coils Coil 8 31 - -
Stsc91930g00001 262 Gene3D Cytochrome P450 1 184 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91930g00001 262 PANTHER CYTOCHROME P450 82C3-RELATED 1 177 - -
Stsc91930g00001 262 PRINTS E-class P450 group I signature 80 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91930g00001 262 PRINTS E-class P450 group I signature 118 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91930g00001 262 PRINTS E-class P450 group I signature 128 151 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91930g00001 262 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91930g00001 262 SUPERFAMILY Cytochrome P450 1 175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91930g00001 262 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 121 130 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91930g00001 Stsc-Chr91930 1195 3392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91930g00001 1 175 Cytochrome P450 AT4G31970 48.603 6.02e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91930g00001 - - lja:Lj0g3v0184099.1 247.669