Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91912g00002 ATGGCCACAAGAAGTAGCTTGAAGACACCATTACCAACTACCTTCTTCGCCCTTCTTTTCTCCCTCTTCATATTCCTTTCTCCATCACTTGCTGATGATGATTTCACCTTCTCTCCATGCAACCTCACACCCCACCCTACATTTTGCACTGCCACTCTACCCTCACACAACATTTTATCCGTACACGACCAGTGCCGGTTCTTCCTTAACCAATCATTAGCAATAACAAAGACGGTTCTCGAATTGGTCTCTTCTTATCTAAGAGACCGGCGTATGATAATTCCGGTTTCAACTTTCCATGCCATCGAAGACTGCGTGAACTTTGCAGAACTCAACATTGATTTCTTGTCCATTGTCCTCGGAGACCCCGAAAGAACCGCCGCTAATAGCTTTCAAAATCATCATTCCGATACGCAAACATTGCTCAGCGCCGTATTAACCAATCTTCAAACGTGTATAGACGGTTTTCACGAAGTAACTCCATATCCAAGAATCACCGGGGAATTATCGAGCGTACTAACAAATGCATACAAGCTTTACAGCGTCTCCCTGGCGCTTTTCACCCAAGGTTGGGTTAAAACCCCGGCTCGTACAAATGAAGAAGACAAACAAACAACCAAAATGAACAGAAAGTTACTGCAGAGAGACTTAGACGGCGATCAAGTGTTGGTAGTTCGAGAGAAAGTGGTGGTGAACCCGAATGGATCCGGGGATTTCACCACCATAAATGATGCTGTGGACGCTGCACCTAACAATACCGGCACCAACAACGGGTACCATGTTATTTATGTTGTTGCTGGGATTTACAATGAGTACGTGTCCCTTTCGAAGTACAAGCAGAACGTGATGATCGTTGGTGACGGAATCAATCACACCGTGATCACTGGCAATCGAAGCGTGGGTGATGGATGGACCACTTTCCAGTCTGCTACTTTCGCTGTAGTTGGAAAAGGGTTTGTAGCAGTGAACATAACATTTCGCAACACCGCGGGCTCCACCAAGCACCAAGCAGTAGCTGTAAGAAATGGTGCAGACATGTCCACGTTCTACACCTGCAGTTTCGAAGGCTATCAAGACACGCTTTACACGCATTCTCTTAGACAGTTCTACAAAAATTATAATATTTACGGTACAGTCGACTTCATCTTCGGCAATGCTGCAACGCTGTTCCAAGACTGTAACATTTTTCCAAGACTACCAATGAAGAACCAATTCAACGCCATCACGGCACAGGGCCGAACCGGTCGGAACCAAAACACCGGAATTTCGATTCAGAACTCGTGGATTGTTGGTGATAATAATGGGAACTATAGCAGCGTGGAGACGTATCTGGGAAGGCCTTGGAAGGAGTATTCAAGAACGGTTTACGCGCAGTGTTTCATGGATGGGATAGTTGATGGAAAAGGTTGGGTTGAGTGGAATGAGGATTTTGCATTGAGGACCTTGTATTATGCGGAATTTGCTAACTGGGGACCAGGTTCAAATATTACTAATAGGGTCACGTGGGAAGGGTACCATCTGGTGGATGAAGATGATGCAGATGGTTTCACCGTGTACAATTTCATTCAAGGTGATTCATGGTTGCCTAAGACTGGAGTACCTTTCAAAGCTGGGTTATTTTGA 1623 0.4535 MATRSSLKTPLPTTFFALLFSLFIFLSPSLADDDFTFSPCNLTPHPTFCTATLPSHNILSVHDQCRFFLNQSLAITKTVLELVSSYLRDRRMIIPVSTFHAIEDCVNFAELNIDFLSIVLGDPERTAANSFQNHHSDTQTLLSAVLTNLQTCIDGFHEVTPYPRITGELSSVLTNAYKLYSVSLALFTQGWVKTPARTNEEDKQTTKMNRKLLQRDLDGDQVLVVREKVVVNPNGSGDFTTINDAVDAAPNNTGTNNGYHVIYVVAGIYNEYVSLSKYKQNVMIVGDGINHTVITGNRSVGDGWTTFQSATFAVVGKGFVAVNITFRNTAGSTKHQAVAVRNGADMSTFYTCSFEGYQDTLYTHSLRQFYKNYNIYGTVDFIFGNAATLFQDCNIFPRLPMKNQFNAITAQGRTGRNQNTGISIQNSWIVGDNNGNYSSVETYLGRPWKEYSRTVYAQCFMDGIVDGKGWVEWNEDFALRTLYYAEFANWGPGSNITNRVTWEGYHLVDEDDADGFTVYNFIQGDSWLPKTGVPFKAGLF 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91912g00002 540 ProSitePatterns Pectinesterase signature 2. 375 384 IPR033131 -
Stsc91912g00002 540 Pfam Plant invertase/pectin methylesterase inhibitor 40 186 IPR006501 GO:0004857
Stsc91912g00002 540 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 189 IPR035513 -
Stsc91912g00002 540 Pfam Pectinesterase 229 525 IPR000070 GO:0030599|GO:0042545
Stsc91912g00002 540 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 189 IPR035513 -
Stsc91912g00002 540 CDD PMEI-like_3 40 191 - -
Stsc91912g00002 540 Gene3D - 223 539 IPR012334 -
Stsc91912g00002 540 NCBIfam pectinesterase inhibitor domain 15 188 IPR006501 GO:0004857
Stsc91912g00002 540 FunFam Pectinesterase 223 539 - -
Stsc91912g00002 540 SUPERFAMILY Pectin lyase-like 227 538 IPR011050 -
Stsc91912g00002 540 PANTHER PECTINESTERASE 38 529 - -
Stsc91912g00002 540 SMART PMEI_2 31 186 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91912g00002 Stsc-Chr91912 9098 11391 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91912g00002 6 540 Carbohydrate Esterase AT4G02330 47.735 1.37e-173 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91912g00002 K01051 - gmx:100810329 722.235