Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91884g00001 ATGGCTACAACACCACATGATCATCAAAATGATGGAACAGTTTCAATTTCAAGGGTTGTGTCTGTGCATCCAAAGATTCAACAACCTCAAAGAGTGTTGAGCCTCTCAAATTTGGATAGGCAGTGTCCAAAGCTCATGCACTTGGTGTTCTTCTACAGCAACTTGAATGATGATTTGTCCCTCAATTCAGTGTTCAACAGCTTGAAAAATGGGTTGGAAGAGACCTTGATTTTGTGGTACCCGGGTGCTGGAAGGTTGATGATGATGAACCCTAATAATAGCAATAATAATGATAATAATAACAATCAAAGTGATAATGGAAAGCTCAATCTTTGGTGCAATAACCAAGGTGCAATTCTTGTGGAGGCTGAGACCAAAGCTAGAATCTCACAACTTGGGGATCTTTCTCAGTACAATGAGTTCTTTGAGAACCTTGTTTATAAGCCTGATTTTGATGCCAATTTCTCAAACATGCCTTTGATTGTTGCTCAGGTAACAAAATTTGGTTGTGGAGGGTATTCAATTGGAATTGGAACAAGCCACTCACTATTTGATGGAGCAGCAACCTATGATTTCTTGTATGCATGGGCTTCAAATTCTGCAATCTTGAAGGGTATTACAATTAGGCCTCTTGAGCTTCCAAGACCAGTGCATGAGAGGGGAATACTTCTAAGTAATGGTGGTAATAACCAACAACTTTCAAAAGGGTCTATGAATTTGCCTTCATGTTCCAGTTTTTATGCTCATCAACCAGTTAGGGCTCTGGCAGTACAACATTTATATCAACTCATAATGCAAGCAACTGCAGCAGCTTCACTTCAAAGTAGTATTAGTGAAACCTCTGAAAGAAATAATATTACTTATCAACAGAAGTGGGTTCTTAAGACCTGTCATCTATCTGCTGCAATGATAGATAACTTGAAAAGGAAGTACTTATCTTCCACCAAGAGAGGTTCTCTTCCATTCTCAACTTTTGAGGTTCTTACAGCTCACCTCTGGAAGGCAAGGACAAAAGCTTTAGGGCTGAGCAAAGAGAAGCTAGTATGCCTTCAATTTGCAGTGGACACAAGGAACAAGACGGTTCCTCCATTACCAAAAGGCTTCAGCGGTAATGCTTATGTTCTTGCCTCAGTTATGATGTCTGTGTCACAGTTATTGGACAATAATTCTACCCTTGAATTCATCATTGAGAAAATCAGAGAAGCCAAGAATGCTGTGAACCACAGCTATGTCAAATCATACATTGATTCCTTGGAATTAGGTTCTGATAATAATAATTCCAATTCTCTTCCTCCACTTAAGGAACTAACTCTTGTTAGTGATTGGACGAGAATGCCCTTCCACAAGATTGAGTTCTTTCATGGAAGAAAAGCAGCTTATGCTTCTCCACTTGCCACTCCTGTTCCTCAGGTTGCTTACTTCATGCAGAGTCCTTCTGATGTTGCTGCTGTTGATCTCAGGATTGGATTTCAAGATGGAAAAACTCTAACTGCTTTTACTCAATGCTTCTTCTTCATCTAA 1521 0.3964 MATTPHDHQNDGTVSISRVVSVHPKIQQPQRVLSLSNLDRQCPKLMHLVFFYSNLNDDLSLNSVFNSLKNGLEETLILWYPGAGRLMMMNPNNSNNNDNNNNQSDNGKLNLWCNNQGAILVEAETKARISQLGDLSQYNEFFENLVYKPDFDANFSNMPLIVAQVTKFGCGGYSIGIGTSHSLFDGAATYDFLYAWASNSAILKGITIRPLELPRPVHERGILLSNGGNNQQLSKGSMNLPSCSSFYAHQPVRALAVQHLYQLIMQATAAASLQSSISETSERNNITYQQKWVLKTCHLSAAMIDNLKRKYLSSTKRGSLPFSTFEVLTAHLWKARTKALGLSKEKLVCLQFAVDTRNKTVPPLPKGFSGNAYVLASVMMSVSQLLDNNSTLEFIIEKIREAKNAVNHSYVKSYIDSLELGSDNNNSNSLPPLKELTLVSDWTRMPFHKIEFFHGRKAAYASPLATPVPQVAYFMQSPSDVAAVDLRIGFQDGKTLTAFTQCFFFI 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91884g00001 506 Gene3D - 268 503 IPR023213 -
Stsc91884g00001 506 Gene3D - 9 232 IPR023213 -
Stsc91884g00001 506 Pfam Transferase family 17 491 - -
Stsc91884g00001 506 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91884g00001 Stsc-Chr91884 7045 11887 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91884g00001 14 491 Monolignol Biosynthesis Gene Families AT5G48930 23.780 5.38e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91884g00001 K15400 - gmx:100779295 618.616