Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91875g00001 ATGGATTCTGTGAATTTGGATTGCCTCACACCAGTCGATCATCTTTCTAAAGATCATGAGCAGATTTCACAAGAATGTTATAATGTTGGAGTGGAACCACCATATGATGATCCTATGAATCCATCTTCTGAACCATGCCCTCTGAATTCTGTTATTGAAGAGGTGCCAGATCATAGTCACATATTAGAGGATGAAATCCCTAGAACTGGCATGTGTTTTGATTCTTTGGAGGAAGCTCATGATTTTTACAAGAATTATGCGGAGAAAGTGGGATTTGTTATCAAGATTAGGAATACAAATCATGTTAAAAATGCTAAGGGTGAGAAGATTCCAATTAATCAGTCAATCCATTGTAATCGAGAGGGTAATTGCATGTCACGAGCGAAGGCACCAAGAAGATCGAAGAAGATCACGGCTGCCATGTGCAATGCAAGGGT 437 0.3959 MDSVNLDCLTPVDHLSKDHEQISQECYNVGVEPPYDDPMNPSSEPCPLNSVIEEVPDHSHILEDEIPRTGMCFDSLEEAHDFYKNYAEKVGFVIKIRNTNHVKNAKGEKIPINQSIHCNREGNCMSRAKAPRRSKKITAAMCNARV 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91875g00001 146 Pfam FAR1 DNA-binding domain 81 145 IPR004330 -
Stsc91875g00001 146 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 41 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91875g00001 Stsc-Chr91875 40 769 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc91875g00001 FAR1 1.4e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91875g00001 - K17604 ahf:112772717 115.546