Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc91873g00001 | ATGGGGCATCTCAATTCAGGTGTGTCCTCTTCAAACCAAATTCATGCTGCTGATGATGCACCTGCCAGTGGAGGTGGTCTCAGTCATAATGGCAAATTCAGTTATGGATATGCTAGCTGTGCTGGAAAGAGGTCTTCAATGGAAGACTTTTATGAAACAAGAGTTGATGGTGTGGATGGTGAAACCGTTGGCCTTTTTGGAGTTTTTGATGGTCATGGTGGCGTTCGTGCTGCAGAATATGTCAAGCAAAACCTGTTTAGTAATTTGATCAGTCATCCAAAATTCATATCCGACACTAAATCTGCGATTGCTGATGCATACAACCATACTGACTCAGAATTTCTGAAATCTGAAAATAGTCATAATAGAGATGCTGGTTCGACTGCTTCTACTGCGATTCTAGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGTTGTTATATGCAGGGGTGGTAAAGCCATTGCTGTTTCTCGAGATCACAAGCCTGACCAGACTGATGAGAGACAAAGGATTGAAGATGCTGGGGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGTGTTCTTGCTGTTTCTCGTGCATTCGGTGATAGGCTCCTGAAGCAGTATGTCGTTGCTGATCCAGAAATCAAGGAAGAAAAAGTCGACAGCTCGCTCGAGTTTCTTATATTGGCAAGTGATGGCCTATGGGATGTTGTCTCCAATGAGGAAGCTGTTAATATAGTGAAACCAATACAGGATGCAGAGGAGGCAGCAAAGAAATTGTTGAAAGAAGCATCTCAAAGAGGAAGTGCTGACAATATCACTTGTGTTGTTGTTCGTTTCTTGATGGACCAAGCTGCTTCTTCTGCCTCTTCTCATGTTACCACCGCCGCCACCACCACCACCACCTCTGCCAATTCTGTTACCCAATCTAAGTAA | 936 | 0.4444 | MGHLNSGVSSSNQIHAADDAPASGGGLSHNGKFSYGYASCAGKRSSMEDFYETRVDGVDGETVGLFGVFDGHGGVRAAEYVKQNLFSNLISHPKFISDTKSAIADAYNHTDSEFLKSENSHNRDAGSTASTAILVGDRLLVANVGDSRVVICRGGKAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIKEEKVDSSLEFLILASDGLWDVVSNEEAVNIVKPIQDAEEAAKKLLKEASQRGSADNITCVVVRFLMDQAASSASSHVTTAATTTTTSANSVTQSK | 311 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc91873g00001 | 311 | SMART | PP2C_4 | 24 | 278 | IPR001932 | - | |
Stsc91873g00001 | 311 | CDD | PP2Cc | 33 | 280 | IPR001932 | - | |
Stsc91873g00001 | 311 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Stsc91873g00001 | 311 | PANTHER | PROTEIN PHOSPHATASE | 27 | 279 | IPR015655 | GO:0004722|GO:0006470 | |
Stsc91873g00001 | 311 | ProSitePatterns | PPM-type phosphatase domain signature. | 65 | 73 | IPR000222 | GO:0043169 | |
Stsc91873g00001 | 311 | Gene3D | - | 26 | 286 | IPR036457 | - | |
Stsc91873g00001 | 311 | SMART | PP2C_SIG_2 | 45 | 280 | IPR001932 | - | |
Stsc91873g00001 | 311 | MobiDBLite | consensus disorder prediction | 291 | 311 | - | - | |
Stsc91873g00001 | 311 | FunFam | probable protein phosphatase 2C 59 | 26 | 284 | - | - | |
Stsc91873g00001 | 311 | SUPERFAMILY | PP2C-like | 29 | 280 | IPR036457 | - | |
Stsc91873g00001 | 311 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Stsc91873g00001 | 311 | Pfam | Protein phosphatase 2C | 39 | 273 | IPR001932 | - | |
Stsc91873g00001 | 311 | ProSiteProfiles | PPM-type phosphatase domain profile. | 34 | 280 | IPR001932 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc91873g00001 | Stsc-Chr91873 | 3233 | 6441 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc91873g00001 | 1 | 291 | PP2C-type Phosphatase Gene Family | AT4G31750 | 85.567 | 0.0 | 514 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc91873g00001 | K17506 | - | gmx:100797070 | 506.138 |