Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91873g00001 ATGGGGCATCTCAATTCAGGTGTGTCCTCTTCAAACCAAATTCATGCTGCTGATGATGCACCTGCCAGTGGAGGTGGTCTCAGTCATAATGGCAAATTCAGTTATGGATATGCTAGCTGTGCTGGAAAGAGGTCTTCAATGGAAGACTTTTATGAAACAAGAGTTGATGGTGTGGATGGTGAAACCGTTGGCCTTTTTGGAGTTTTTGATGGTCATGGTGGCGTTCGTGCTGCAGAATATGTCAAGCAAAACCTGTTTAGTAATTTGATCAGTCATCCAAAATTCATATCCGACACTAAATCTGCGATTGCTGATGCATACAACCATACTGACTCAGAATTTCTGAAATCTGAAAATAGTCATAATAGAGATGCTGGTTCGACTGCTTCTACTGCGATTCTAGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGTTGTTATATGCAGGGGTGGTAAAGCCATTGCTGTTTCTCGAGATCACAAGCCTGACCAGACTGATGAGAGACAAAGGATTGAAGATGCTGGGGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGTGTTCTTGCTGTTTCTCGTGCATTCGGTGATAGGCTCCTGAAGCAGTATGTCGTTGCTGATCCAGAAATCAAGGAAGAAAAAGTCGACAGCTCGCTCGAGTTTCTTATATTGGCAAGTGATGGCCTATGGGATGTTGTCTCCAATGAGGAAGCTGTTAATATAGTGAAACCAATACAGGATGCAGAGGAGGCAGCAAAGAAATTGTTGAAAGAAGCATCTCAAAGAGGAAGTGCTGACAATATCACTTGTGTTGTTGTTCGTTTCTTGATGGACCAAGCTGCTTCTTCTGCCTCTTCTCATGTTACCACCGCCGCCACCACCACCACCACCTCTGCCAATTCTGTTACCCAATCTAAGTAA 936 0.4444 MGHLNSGVSSSNQIHAADDAPASGGGLSHNGKFSYGYASCAGKRSSMEDFYETRVDGVDGETVGLFGVFDGHGGVRAAEYVKQNLFSNLISHPKFISDTKSAIADAYNHTDSEFLKSENSHNRDAGSTASTAILVGDRLLVANVGDSRVVICRGGKAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIKEEKVDSSLEFLILASDGLWDVVSNEEAVNIVKPIQDAEEAAKKLLKEASQRGSADNITCVVVRFLMDQAASSASSHVTTAATTTTTSANSVTQSK 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91873g00001 311 SMART PP2C_4 24 278 IPR001932 -
Stsc91873g00001 311 CDD PP2Cc 33 280 IPR001932 -
Stsc91873g00001 311 MobiDBLite consensus disorder prediction 1 17 - -
Stsc91873g00001 311 PANTHER PROTEIN PHOSPHATASE 27 279 IPR015655 GO:0004722|GO:0006470
Stsc91873g00001 311 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Stsc91873g00001 311 Gene3D - 26 286 IPR036457 -
Stsc91873g00001 311 SMART PP2C_SIG_2 45 280 IPR001932 -
Stsc91873g00001 311 MobiDBLite consensus disorder prediction 291 311 - -
Stsc91873g00001 311 FunFam probable protein phosphatase 2C 59 26 284 - -
Stsc91873g00001 311 SUPERFAMILY PP2C-like 29 280 IPR036457 -
Stsc91873g00001 311 MobiDBLite consensus disorder prediction 1 24 - -
Stsc91873g00001 311 Pfam Protein phosphatase 2C 39 273 IPR001932 -
Stsc91873g00001 311 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91873g00001 Stsc-Chr91873 3233 6441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91873g00001 1 291 PP2C-type Phosphatase Gene Family AT4G31750 85.567 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91873g00001 K17506 - gmx:100797070 506.138