Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91869g00001 ATGTCAGAGGGATTTGAGATTCATCATCAAGAGAATAATGAAGGGAGTAGTGGAGGCAAGAGTAGTAGTAACAATGATAATGAGGGTGAGGAAAATTCATTGGGTTCGTGTTCGTTGAAATGCTCATCATTTGACTTGAATGAAGAAGCGGGAAGTAGTGAAGAGGAAGAAGAAGAGAATAATAATGAGGAGAAAGAAGGAAAGGAGGAGGATAATGATGAAGAAGGGAATTCATCAAGGAACAGAAGAAGCAGCAGCAGCACAAACTCAAGAGAAGAAGGGAAGAGATCATCAGGGAGTGGTGTGAGACAATATGTTCGATCAAAGATGCCAAGGCTTCGTTGGACTCCTGATCTTCATCTCTCCTTTGTCCATGCTGTTCAGAGGCTTGGAGGTCAAGAAAGAGCAACACCTAAATTGGTGCTTCAGCTAATGAATGTGAGAGGACTAAGCATTGCTCATGTCAAGAGTCACTTACAGATGTATCGAAGCAAGAAACTTGATGATTCTGGCCAAGTAGTAAGAAGTGAAACACAGAGAAGCAAGAATGAAGTAGGTGGTATGATGTATGAGAGGATGATGATGAAGAGTAGTCCTCATCAGCATTTCAAGATGGGAAATGGTGGCATTATTCTTACTACTCCATTCTCCCTCCCACATTCAAAGCCCTCAAACCATTTATGGCACTTAAATCATCATCATCATCAACAACTCCCTTTTACTAGAAGACCAAGTTACCCAACACCACCATTGATGCAAAATCAACTAATGGATGCAGCAGCAGGCAGCAGAATTACACCCATGAGACCAAGCCGATTTCTTGAAGAGAAAAAGTGGCCTCCTTTTGAAACTCACTGGAAATTCAAAAGGCTTCCTATTACCAACAACATTATCCCTACTACACTAGCCTCTTCACAGTTATCCTCTACTGCTGTTAATCTTGTTCATCAATTTCCCACCACTACTGCTACTACTACTCCATCTGACTTCATCACCTTTGGAGACACAAGAATCAGGGATTATCTATCAAACTCCAAGTTAAATAATAATCAAGACAAGTTGCAGAAAGAGAAGCAATGGGTGCCTGATTTGCAACTGGGTTTGAGTCATCATCCCAAAGATGGAGACAACAATGATGGCACAGGAACCCCAGAAATTAACACTAAACTTTCACTTTCATAG 1182 0.412 MSEGFEIHHQENNEGSSGGKSSSNNDNEGEENSLGSCSLKCSSFDLNEEAGSSEEEEEENNNEEKEGKEEDNDEEGNSSRNRRSSSSTNSREEGKRSSGSGVRQYVRSKMPRLRWTPDLHLSFVHAVQRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDDSGQVVRSETQRSKNEVGGMMYERMMMKSSPHQHFKMGNGGIILTTPFSLPHSKPSNHLWHLNHHHHQQLPFTRRPSYPTPPLMQNQLMDAAAGSRITPMRPSRFLEEKKWPPFETHWKFKRLPITNNIIPTTLASSQLSSTAVNLVHQFPTTTATTTPSDFITFGDTRIRDYLSNSKLNNNQDKLQKEKQWVPDLQLGLSHHPKDGDNNDGTGTPEINTKLSLS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91869g00001 393 MobiDBLite consensus disorder prediction 72 90 - -
Stsc91869g00001 393 MobiDBLite consensus disorder prediction 11 48 - -
Stsc91869g00001 393 MobiDBLite consensus disorder prediction 1 105 - -
Stsc91869g00001 393 Pfam Myb-like DNA-binding domain 113 163 IPR001005 -
Stsc91869g00001 393 Gene3D - 110 167 - -
Stsc91869g00001 393 MobiDBLite consensus disorder prediction 366 393 - -
Stsc91869g00001 393 Coils Coil 46 75 - -
Stsc91869g00001 393 FunFam Myb family transcription factor 109 167 - -
Stsc91869g00001 393 NCBIfam myb-like DNA-binding domain, SHAQKYF class 111 166 IPR006447 GO:0003677
Stsc91869g00001 393 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 81 189 IPR046955 GO:0003700
Stsc91869g00001 393 SUPERFAMILY Homeodomain-like 109 165 IPR009057 -
Stsc91869g00001 393 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 167 IPR017930 -
Stsc91869g00001 393 MobiDBLite consensus disorder prediction 49 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91869g00001 Stsc-Chr91869 6196 9904 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91869g00001 102 172 G2-like Transcription Factor Family AT2G42660 81.690 6.23e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc91869g00001 Myb_DNA-binding 8.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91869g00001 - - adu:107482239 407.527