Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91852g00003 ATGGTTCTGTATCATGGTCCAGCTGGTATAGGAAATTCAGAAACAGGAACGCAACATCAGCATGTATCACAAAATGAAACTGGATTGTTAACTGATGGGGTGAAGTATATAGGATTAGATCAATTCAGTCTTGGGGTTATATGCATTGTAGGACACTGCTTATCTATGGGTGCTTATCTAAGCATTCAGGCACAAGTACTGAAAAAGTACCTCACAAACATATCTCTCACAGCATATTCATACTTCTTTGGAGTTGTATTGATGGTGATAATAACAATGTTTTTGCCTGATGGGATATCTGACTGGAGTTTACAGAAATCAGAAATACTTGCTGTTGTTTATGCTGGAATTGTTGCATCAGCCCTTGCTTATGGACTGACAACATGGTGCACCAAGATTTTGGGGCCAATGATGATTTCCCTCTTTAGCTATCTTCAACCAGCATGTTCTACCTCCTATCCCTCATTTTCCTTGGTAGTCCTGTTTACTTAG 492 0.3943 MVLYHGPAGIGNSETGTQHQHVSQNETGLLTDGVKYIGLDQFSLGVICIVGHCLSMGAYLSIQAQVLKKYLTNISLTAYSYFFGVVLMVIITMFLPDGISDWSLQKSEILAVVYAGIVASALAYGLTTWCTKILGPMMISLFSYLQPACSTSYPSFSLVVLFT 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91852g00003 163 Pfam EamA-like transporter family 44 151 IPR000620 GO:0016020
Stsc91852g00003 163 PANTHER WAT1-RELATED PROTEIN 1 152 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91852g00003 Stsc-Chr91852 15497 16253 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91852g00003 1 150 Nodulin-like Gene Family AT5G45370 45.161 3.99e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91852g00003 - - gmx:100787738 171.014