Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91844g00003 ATGGCAATGTTGTTTCTCTATGCAGCAACAATAATTGTATCAACCTTCCTATTCCTTTATGTTCATCGTCATAGAAGAAATTCTTGTAGAACCCCCCTCAGCATAGATTGGCCAATCCTTGGCATGTTACCACAAGTCCTTTGCAATTTGTCCCAAATCCATGATTTTGTAACAAATGTTTTGAGAGAAAAAGGTGGCACGGGTGAATTTATGGGGCCATGGTTCACCAATTTGAACTATATGGTCACTTCTGATCCGTTGAATGTTCATCACATAATGAGCAAACACTTTGACAACTATGTCAAGGGCCCCGAGTTTCGCGAGATCTTCCAACCTTTCGGAGAAGATTTTCTCTCCGCAGATTCTGAGGCTTGGAAATACACGAGGACCTTGTTTCATTCCTTGTTCCGGAAAAAGAGTTTTGAGCCCATGTTGGAAAACAACATTCAAAAGAAGGTTCTAAATACCTTGCTTCCGATATTTGAACATGCATGGTTGCATGGGAAGGTTTTGGATCTTCAAGATGTGTTTAGTCGATTTATGTTTGACGAGACATGCCTCATGCTTTTAGGATATGATCCTAATAGTCTCTCAATCGACTTTCCATTGGTCGAAGTTGAGAAGGCTTTCGATGAAGTTGAGGAGTCCATATTCTATAGGCAAACTGTGCCAAGAAGTGTTTGGAAATTTCAAGAATGGCTTCAAATTGGTGAAGAGAAGAAGTTGACAAAAGCATGTAAAGTTTTTGACCAATTTCTATATTCATCCATTGCAACTAAGCGCCAAGAGTTAAGTAAATGCAACAAAGGTGGTGATGACCTTCTCAGTGATCTCATGATGAGAGAAGAAAACCGTGGAATTGTGCATGATGATAAATTTCTAAAAGATGCTATATTCAATCTTTTCGTAGCTGGAAGAGATACTATAACTTCGGCTCTTACATGGTTCTTTTGGCTTGTTGCAACACACCCATCGGTGGAAGCCAATATTCTTGATGAAATAGAAGAAATTTTTGGTGCCACCAAGGAGGAGAAACAGGAAGTTTTAGGGATAAATGATGTGAAGAAGCTAATCTATCTACATGGTGCTCTATGTGAAAGTTTGAGACTATTTCCATCTGTCCCTATTGAACGTAAGCAATCATTGAAAGGTGATATACTTCCAAGTGGTCATCGTGTCAATCCAAATACCGTTATTTTGGTCTTTACCTATGCAATGGGAAGGTTTGAAGAGATATGGGGAAAAGATTGCTTGAAATTTAAACCAGAAAGGTGGATTTCCGAAAAAAGAGAAATAATACATGTTCCATCTTATCAGTTTTTTAGTTTTAATGCAGGTCCTAGAACGTGCTTGGGTAAGGACGTGTCTTTTTTCCAAATGAAAATTGTGGCAACTGCTATTTTGCGCAACTATCATATACAAGTGGTGGAAAATCATTCTATTTCTCCAGCTCACTCGATTATGCTTCTTATGAAGCATGGCCTCAAGGCTCCAGTTACCACACACCAGCTAGAAAAGGAAGATTCAAAGTCATTATAG 1539 0.3886 MAMLFLYAATIIVSTFLFLYVHRHRRNSCRTPLSIDWPILGMLPQVLCNLSQIHDFVTNVLREKGGTGEFMGPWFTNLNYMVTSDPLNVHHIMSKHFDNYVKGPEFREIFQPFGEDFLSADSEAWKYTRTLFHSLFRKKSFEPMLENNIQKKVLNTLLPIFEHAWLHGKVLDLQDVFSRFMFDETCLMLLGYDPNSLSIDFPLVEVEKAFDEVEESIFYRQTVPRSVWKFQEWLQIGEEKKLTKACKVFDQFLYSSIATKRQELSKCNKGGDDLLSDLMMREENRGIVHDDKFLKDAIFNLFVAGRDTITSALTWFFWLVATHPSVEANILDEIEEIFGATKEEKQEVLGINDVKKLIYLHGALCESLRLFPSVPIERKQSLKGDILPSGHRVNPNTVILVFTYAMGRFEEIWGKDCLKFKPERWISEKREIIHVPSYQFFSFNAGPRTCLGKDVSFFQMKIVATAILRNYHIQVVENHSISPAHSIMLLMKHGLKAPVTTHQLEKEDSKSL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91844g00003 512 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91844g00003 512 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91844g00003 512 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91844g00003 512 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91844g00003 512 Pfam Cytochrome P450 36 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91844g00003 512 SUPERFAMILY Cytochrome P450 35 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91844g00003 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Stsc91844g00003 512 CDD CYP86A 69 495 - -
Stsc91844g00003 512 PANTHER CYTOCHROME P450 24 495 - -
Stsc91844g00003 512 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91844g00003 512 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91844g00003 512 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91844g00003 512 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91844g00003 512 Gene3D Cytochrome P450 19 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91844g00003 Stsc-Chr91844 5155 7160 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91844g00003 1 500 Cytochrome P450 AT4G32170 42.801 7.35e-149 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91844g00003 - - gmx:100780625 660.988