Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91832g00003 ATGTCATTACTAACTACTAAATGTTTTGATGATGTTGATGCCGTCAAAACCAAGGTGTCTTATGCTAGGGAGAAGAACTTACTTGGTTATGCTGTGTGGGAACTGTCCCACGATGACAATTGGGTGCTTTCTACTGCAGCAGTGGGGGGATTGATCATTTTGATAGCAACTGTCTTATGTGCCCTTCTATTGGGAGTTATGATTTACTACTTCTGGAAGAGGATCTTTCAATCGAAGGATCTGAAAAAGGCAACTAAAGATGCCGGGGGTTTTCATGGCAGTGTTCCTGATGTCCGAGTCTTCAGCCTTTCGGAAATTAAGTTGGCCACGAAGAGATTTTCAATTGAAAATAAGCTTGGTCAGGGTGGCTATGGTCCTGTTTATAAGGGAGTTCTACGAGATGGTAAGGAAGTAGCAGTGAAAATGTTAGCTAAAACTTCTACACAAGGTTTTGAAGAGTTCAAAAACGAGATAACACTTACTGCAAGACTACAACACGTGAATCTTGTTCGCTTATTGGGTTTCTACATTGATAAGGAAGAGCATATGTTGATCTAA 558 0.4068 MSLLTTKCFDDVDAVKTKVSYAREKNLLGYAVWELSHDDNWVLSTAAVGGLIILIATVLCALLLGVMIYYFWKRIFQSKDLKKATKDAGGFHGSVPDVRVFSLSEIKLATKRFSIENKLGQGGYGPVYKGVLRDGKEVAVKMLAKTSTQGFEEFKNEITLTARLQHVNLVRLLGFYIDKEEHMLI 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91832g00003 185 Gene3D Glycosidases 10 40 - -
Stsc91832g00003 185 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 91 185 - -
Stsc91832g00003 185 SUPERFAMILY (Trans)glycosidases 9 47 IPR017853 -
Stsc91832g00003 185 Gene3D Phosphorylase Kinase; domain 1 75 185 - -
Stsc91832g00003 185 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 1 54 IPR001223 GO:0005975
Stsc91832g00003 185 Pfam Protein kinase domain 114 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91832g00003 185 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 49 185 - -
Stsc91832g00003 185 SUPERFAMILY Protein kinase-like (PK-like) 92 184 IPR011009 -
Stsc91832g00003 185 ProSiteProfiles Protein kinase domain profile. 113 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91832g00003 Stsc-Chr91832 14165 15304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91832g00003 51 185 Receptor kinase-like Gene Family AT4G23230 45.324 7.62e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc91832g00003 Pkinase 4.4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91832g00003 - - gmx:100787480 218.779