Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91832g00002 ATGTCCACTTGTGATCTGGCAAGACACGTGGCATCACACACTCCCTGTGGGCCCCTCTCTCTTCTGCTAGCCACTGAACAAACTCAACCATTCCATTCCTTCCCCTCTCTCCTTCTCTCTCTCTCTCTCTCTCTCTTGTTCGGTTCTTTACTCGCACTACCTCTTCCACTTCACCACCGTTACACCGTTACGCTTTCTCTTTTTGTCTTCTTTCTTGAATTCTTTCTCTCTGTTGTTGAGGTGATGGAACCGGAGAAGCGGTGCGCTTCAAGCTCTTTCTCTTCTTCACCTTCTTCGTCCTCTTCGTCTGCGTCGGAGGAGCACCGTGCCGACCGCCTCGTCAAGACGGAGATTGAAGCCGCCGAGACTCTCGCTGACTTGGCGCACCTCGCCATGCGCGAGACCACCGCCTCTCGCTCCGCCGACGCGCCACGATTCACGCGCCACTCGCACTCGGATCTCTCTCTCTCTGCCCCTCTCCCCGGGGGAGAAGCTATTGCAGGCCAGCAGCTAGATGAAAGATCGGTTGCTTGTAATTCTCGAGAAACAGAAAGGAGGCAGGATGAATGCTTAAGACATATGAAGGTGGAGCAGCAGGATGCTGATTCACTGAAGACTACAAGCTACGCTGCCGTTCGCTGCAGCAAGTCAAGGCGTAATTTAACTGAGGAAGAAAAAGAAGCACGGAGGGTTCGCAGAATATTGGCGAACAGAGAGTCAGCTAGGCAGACAATCCGTCGTAGACAGGCTTTGTGCGAAGAGTTAACCAGAAAAGCTTCCAATTTAGTGCTGGAGAACGAAAACCTGAAGAAGGAGAAGGATATGGCTTTGAAAGAGTATCAGTCTTTGGAGACTACAAATAAGCATTTAAAGACACAGATAGCCAACTCAATAAACAATGAGGTAGACAAAACTCCTGTTGAACAGGAATCATCTGTGGCTGAGGTAACAAATTTATCTGGTAGTGCCCCATGGTTCGTTTATAACCATTTTCCAGTCACACAATTATTTTGGCCCCCCATCATTCAGTCTTCTAATCCAGTTCAAGCACAACATCCACCATTTGGTTCTATTCCCATTCCGGCTACTGTTTCTATGCCATGCTCTTCCGAGACCGACTCATTTCACAAGCAAAACAACCTTGTAAATGACAATAGGACACAAAATCCATTATACATGTTTCCATGTCCCTGGTTGTTCCCTCTTCCAGAGTTTGGAAATGGACAACCAGCACCACCTTCAATTGGCCAAATTGATAAACGAGATGAACTTTCTCTAGGTAAACATTGTAGTCCTTCTTTGTCTTTGAATACAGTGGCAACTGTGGATTATCAACCAGCTCTACCAATAAAACCTAAAACTGAAGCTTCTGGCTGGACAGAGGCCAGATCAACCCATGATTCTGGCAACACCTCTATAACATTTCCATTGGATGGAGCTGAGCAGAAAACAGGAAGTCACATTATAGGGAGCTTCCATGGACCTTCACTTGATTGTAATGGGCATGTGTCTGATGTCAAGCAGGAGCAAGAGCAAGAGCATGACCTTGAGCTTCAACTACATTCCGTTCCTAAGTTATCTTTGTCTTCAACAGCATCTCATAATGCAACTTCTCCACAGGAAAAGAAAGAAACAAAGTCCTTATGCTCGGGTAAAAATTTAGTGGATGCAATTGCTGCGACAGAGGCTAGAAAGAGGAGAAAAGAACTAACTAGGTTAAAGAGCATCCATAACCGACAGTACCGGATGCATTGTTGA 1758 0.4664 MSTCDLARHVASHTPCGPLSLLLATEQTQPFHSFPSLLLSLSLSLLFGSLLALPLPLHHRYTVTLSLFVFFLEFFLSVVEVMEPEKRCASSSFSSSPSSSSSSASEEHRADRLVKTEIEAAETLADLAHLAMRETTASRSADAPRFTRHSHSDLSLSAPLPGGEAIAGQQLDERSVACNSRETERRQDECLRHMKVEQQDADSLKTTSYAAVRCSKSRRNLTEEEKEARRVRRILANRESARQTIRRRQALCEELTRKASNLVLENENLKKEKDMALKEYQSLETTNKHLKTQIANSINNEVDKTPVEQESSVAEVTNLSGSAPWFVYNHFPVTQLFWPPIIQSSNPVQAQHPPFGSIPIPATVSMPCSSETDSFHKQNNLVNDNRTQNPLYMFPCPWLFPLPEFGNGQPAPPSIGQIDKRDELSLGKHCSPSLSLNTVATVDYQPALPIKPKTEASGWTEARSTHDSGNTSITFPLDGAEQKTGSHIIGSFHGPSLDCNGHVSDVKQEQEQEHDLELQLHSVPKLSLSSTASHNATSPQEKKETKSLCSGKNLVDAIAATEARKRRKELTRLKSIHNRQYRMHC 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91832g00002 585 Coils Coil 238 300 - -
Stsc91832g00002 585 SMART brlzneu 225 289 IPR004827 GO:0003700|GO:0006355
Stsc91832g00002 585 MobiDBLite consensus disorder prediction 453 478 - -
Stsc91832g00002 585 CDD bZIP_plant_GBF1 230 281 IPR045314 GO:0003700|GO:0006355
Stsc91832g00002 585 MobiDBLite consensus disorder prediction 138 172 - -
Stsc91832g00002 585 MobiDBLite consensus disorder prediction 458 478 - -
Stsc91832g00002 585 Pfam bZIP transcription factor 225 287 IPR004827 GO:0003700|GO:0006355
Stsc91832g00002 585 PANTHER G-BOX-BINDING FACTOR 3-RELATED 95 322 IPR044827 GO:0003700|GO:0006355|GO:0043565
Stsc91832g00002 585 MobiDBLite consensus disorder prediction 89 104 - -
Stsc91832g00002 585 SUPERFAMILY Leucine zipper domain 229 284 IPR046347 GO:0003700|GO:0006355
Stsc91832g00002 585 MobiDBLite consensus disorder prediction 529 548 - -
Stsc91832g00002 585 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 227 290 IPR004827 GO:0003700|GO:0006355
Stsc91832g00002 585 MobiDBLite consensus disorder prediction 89 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91832g00002 Stsc-Chr91832 8850 13757 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91832g00002 214 585 bZIP Transcription Factor Family AT1G19490 38.070 1.88e-55 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc91832g00002 bZIP_1 3.8e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91832g00002 - - ahf:112754487 830.091