Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91779g00001 ATGGAGCCTAATAACAATTCTTCCTCTAATAATAATGATGGTGTTATTACTACTACTTATGATGATGACAAGAAGGCACTAGAGAAGAAAAAGAAAGGTATAATAATAAGATACATGGAATGTCTGAAGAACCATGCAGCTTCACTTGGTGGCAATGCAACTGATGGGTGTGGTGAGTTCATGCCTTGTGGTGAACAAGGTAGCATTGAAGCACTCACCTGTGCTGCATGCAATTGCCATAGAAACTTTCACAGGAAGGAGATTCAATCTCATCAAACTTATCATCATCAAATGATAATGAACCCTCTTTTTGCACACTCAATTAATAGCTTTTCTGATCAATCTTATGATCATAACAATACCAAGGATTATTGTGAAGAAGGGGTAATGGTGAAGATGAAGAAGAGGTTCAGGGCAAAGTTCACACAAGAACAGAAGGAGAAGATGCTCGATTTCGCGGAGAAGGCAGGCTGGAAGATACAGAAGCTAGATGAATCAATGGTGAACAAGTTTTGCCAAGAGCTTGGGATCAAGAGAAGGGTACTCAAGGTTTGGATGCACAATAACAAGAACACTTTTGCTGCCAAGAACAAAAACAGGAATCTTCCAACAACCACCTAG 621 0.3961 MEPNNNSSSNNNDGVITTTYDDDKKALEKKKKGIIIRYMECLKNHAASLGGNATDGCGEFMPCGEQGSIEALTCAACNCHRNFHRKEIQSHQTYHHQMIMNPLFAHSINSFSDQSYDHNNTKDYCEEGVMVKMKKRFRAKFTQEQKEKMLDFAEKAGWKIQKLDESMVNKFCQELGIKRRVLKVWMHNNKNTFAAKNKNRNLPTTT 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91779g00001 206 FunFam Zinc-finger homeodomain protein 2 118 195 - -
Stsc91779g00001 206 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 37 88 IPR006456 -
Stsc91779g00001 206 SUPERFAMILY Homeodomain-like 128 192 IPR009057 -
Stsc91779g00001 206 NCBIfam homeobox domain, ZF-HD class 134 191 IPR006455 -
Stsc91779g00001 206 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 13 192 - -
Stsc91779g00001 206 Pfam ZF-HD protein dimerisation region 36 88 IPR006456 -
Stsc91779g00001 206 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 38 87 IPR006456 -
Stsc91779g00001 206 Gene3D - 112 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91779g00001 Stsc-Chr91779 2704 3324 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91779g00001 29 199 ZF-HD Transcription Factor Family AT2G02540 49.524 1.91e-66 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Stsc91779g00001 ZF-HD_dimer 3.8e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91779g00001 - - adu:107466050 298.901