Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91772g00002 ATGTCTGATTTCGCCTTGTCCTTCGACAAGGCATCCAGGCTATCGGCCGAGAGGGCGATGGCTGTGTCGCCTTTGGTATGGAAGTTGAAGAGACTTTTCAACATAGGAAGTGAGAGGGAGCTAAGAGAAGCTCTTAGAGTGATAAACATGTTGGCAAAAGAGGTCATAAATCAAAGGAGGAAAATGGGGTTTTCTAAACACAAGGATTTGTTGTCAAGATTCATGAACAATGTTGATGATGAGACATGTTTGAGAGACATTGTAATAAGTTTCTTATTGGCTGGTCGTGACACCGTGGCTTCTGCCCTCACAAGCTTCTTTTGGTTGCTTGCAAAACACCCTCAAGTGGAGTTAGAGATTCTCCTTGAAGCAGATAAGGTAATTGGAGCAAACAAGGAGCTTAGAAGCTTTGAAGAGCTTGGGAAATTGCACTATTTGCAAGCAGCAGTGTATGAGTGTATGAGATTGTATCCACCAGTTCAATTTGATTCAAAATTTTGTGTAGAGGATGATGTGTTACCTGATGGGACAAAAGTGAAGAGTGGAACTAGGGTTACCTACCACCCTTATGCAATGGGGAGATTGGAAGATTTATGGGGTGAAGATTCCATGGAGTTTAGGCCACAAAGGTGGTTGAAAGGTGGTGTTTTCCACCATGAGAATCCATTCAAATACCCAGTTTTTCAAGCTGGGTTAAGGGTTTGTATGGGAAAAGAAATGGCCCTAATGGAGATTAAGTGTGTCACACTCTCTTTGATTAGAAGCTTTCATTTCAAATTGCTGCCTCCGGTTGTTAATCATGCTACCCCGAGATTCTCTCCCGGCCTCACCGCCACTTTCAGATTCGGCCTTCCGGTAATCGTCGGCGACAGAAAAATTGAATTTTCTGAGTGA 894 0.4329 MSDFALSFDKASRLSAERAMAVSPLVWKLKRLFNIGSERELREALRVINMLAKEVINQRRKMGFSKHKDLLSRFMNNVDDETCLRDIVISFLLAGRDTVASALTSFFWLLAKHPQVELEILLEADKVIGANKELRSFEELGKLHYLQAAVYECMRLYPPVQFDSKFCVEDDVLPDGTKVKSGTRVTYHPYAMGRLEDLWGEDSMEFRPQRWLKGGVFHHENPFKYPVFQAGLRVCMGKEMALMEIKCVTLSLIRSFHFKLLPPVVNHATPRFSPGLTATFRFGLPVIVGDRKIEFSE 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91772g00002 297 Gene3D Cytochrome P450 3 276 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91772g00002 297 PRINTS P450 superfamily signature 235 246 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91772g00002 297 PRINTS P450 superfamily signature 226 235 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91772g00002 297 PRINTS P450 superfamily signature 94 111 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91772g00002 297 PRINTS P450 superfamily signature 148 159 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91772g00002 297 PRINTS E-class P450 group I signature 83 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91772g00002 297 PRINTS E-class P450 group I signature 103 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91772g00002 297 PRINTS E-class P450 group I signature 147 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91772g00002 297 PRINTS E-class P450 group I signature 225 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91772g00002 297 PRINTS E-class P450 group I signature 235 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91772g00002 297 PANTHER CYTOCHROME P450 3 281 - -
Stsc91772g00002 297 SUPERFAMILY Cytochrome P450 7 291 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91772g00002 297 Pfam Cytochrome P450 26 263 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91772g00002 Stsc-Chr91772 16219 17639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91772g00002 1 291 Cytochrome P450 AT2G27690 56.419 3.99e-112 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91772g00002 K20624 - jre:108981355 441.039