Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91758g00001 ATGGTTAGAGAACCACAATGCCAGGAGAAACAACTAACATCATGGTTGGTGGACAAAAGTAGAATTGCAACGAAAATAAAGTGTGCATCAGGAGCTTGTGATCCTAACCAAGTTGTTTGGAAAAGCAATCCTACCAAGGCTTGCCCGAATTGTCATCATGCTATTGACAATAGTGATGTAACTCAAGATTGGCCTGGCTTACCAAAAGGGGTTAAATTTGATCCGTCCGATCAAGAGATAATCTGGCATTTGCTTGCAAAGGCTGGTGTAGGAAATTTAAAACCTCATCCTTTCATTGATGAATTTATTACTACTCTTGAAGTCGATGATGGAATTTGTTATACTCATCCTCAACATTTACCTGGTGTCAAGCAAGATGGAAGAGCTTCACATTTCTTCCACAGAGCAATAAAGGCCTATAATACTGGCACCCGAAAGCGTAGAAAAGTGCATGGTCAGGATGATGTCCGCTGGCACAAGACTGGAAAGACTAAACCGGTCGTGCTGGATGGGGTTCAAAAGGGTTGCAAAAAAATCATGGTTCTGTATACAAATGCAGCGAGAGGAGGAAAGTCAGAGAAAACTAATTGGGTTATGCACCAATATCACCTAGGGACTGAAGAAGACGAAAAGGATGGAGAATATGTTATTTCTAAAGTGTTCTATAAAGAAGAGCAGGATATACTTAAATCCGAAGAAAACAAGAATGCAACAGTTGTGAATGTAGATCCAGTCACTCCCAAATCTGTGACTCCTGAACCTCCTTGTAGTGAAAGGCAAGATTCAGATCTAGACCTGGATCGAGACCTAGGGCAAGAAGGACTCACTTTTCCTGAGATGGATTGCTTAGATGAAATTCAAGCTGACTCTGAAGAGTTTGCAAAAGCTAAGCCATCGGTACTGGAGAAACAAGAAAATGAAGGGATGGACAATAAGGAAACTAATGCTCATGAAGCACAACCGTGGTGGGATAGTGATTCGCAGAATCTATTAGACTCACAACAACTTGTCGAAGCATTAACTCTCTGTGAAGATATCCTTCACAGCCAATCTTCCAACAAAGACGATGAAAATGATAAGAACCAAACTGGTCTATCTGTTTATGCTCGTCTCGGACCAGAGCATCTGAAGAAGGATATTGAGGAGTGTCAGAAGCTAGCCCTTGATGCAAAAAATGCAGGACCAGAGCATCAGAAGGATATTGAAGAGGGCCAAGATCTTGATCCTGACCTCGCAAATATAGAGCGTGATACTCCTCCTGAGCAACGACTGAGTCAGCTGGAATTTGGATCGCAAGATAGCTATCGTTCCTGGGGTTTTCAAGGCATAAACTAG 1335 0.421 MVREPQCQEKQLTSWLVDKSRIATKIKCASGACDPNQVVWKSNPTKACPNCHHAIDNSDVTQDWPGLPKGVKFDPSDQEIIWHLLAKAGVGNLKPHPFIDEFITTLEVDDGICYTHPQHLPGVKQDGRASHFFHRAIKAYNTGTRKRRKVHGQDDVRWHKTGKTKPVVLDGVQKGCKKIMVLYTNAARGGKSEKTNWVMHQYHLGTEEDEKDGEYVISKVFYKEEQDILKSEENKNATVVNVDPVTPKSVTPEPPCSERQDSDLDLDRDLGQEGLTFPEMDCLDEIQADSEEFAKAKPSVLEKQENEGMDNKETNAHEAQPWWDSDSQNLLDSQQLVEALTLCEDILHSQSSNKDDENDKNQTGLSVYARLGPEHLKKDIEECQKLALDAKNAGPEHQKDIEEGQDLDPDLANIERDTPPEQRLSQLEFGSQDSYRSWGFQGIN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91758g00001 444 MobiDBLite consensus disorder prediction 390 429 - -
Stsc91758g00001 444 MobiDBLite consensus disorder prediction 241 264 - -
Stsc91758g00001 444 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 13 384 IPR044799 GO:0003700
Stsc91758g00001 444 MobiDBLite consensus disorder prediction 390 417 - -
Stsc91758g00001 444 ProSiteProfiles NAC domain profile. 67 223 IPR003441 GO:0003677|GO:0006355
Stsc91758g00001 444 Gene3D NAC domain 76 228 IPR036093 GO:0003677|GO:0006355
Stsc91758g00001 444 Pfam No apical meristem (NAM) protein 68 204 IPR003441 GO:0003677|GO:0006355
Stsc91758g00001 444 FunFam NAC domain-containing protein 8 76 227 - -
Stsc91758g00001 444 SUPERFAMILY NAC domain 52 223 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91758g00001 Stsc-Chr91758 4322 12722 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91758g00001 23 243 NAC Transcription Factor Family AT1G28470 52.586 1.60e-75 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc91758g00001 NAM 8.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91758g00001 - - adu:107491284 777.319