Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91713g00004 ATGTTTGCAATCGTTGTTCTCTCTCCAAACTACGCTTCCTCCACCTGGTGCTTGGACGAGATCCAAAAGATAATTGAATGCAAGAACAAGTTAGGGCAACACATCGTGCCGGTGTTCTACGGTGTGGACCCTTCTGATGTGAGGCACCAGAAAGGAACCTTCGGAGAAGCTTTCACGAAACATGAACATAGATTCGGGGAAGAAAGTGACAAGGTTAGAAGATGGAGAGAGGCGTTAACACAAGTTGCCAATTACTCTGGTTGGAGCACCAAAAATCAGAGTGAGGCAACATTGGTGGAAAACATTTCTCAAAGTATACATAAGATATTGATCCCAAGCTTGCCATCTTCCATGAACAAGCTTGTAGGCATTGATTCAAGAGTGGAACAAGTGATTAGTCACATTGGTATTGGCCTGAATGATGTTCGTTATATAGGCATATGTGGGATGGGTGGCATAGGTAAGACAACTATTGCCAGAATTGTATATGAAGCCATCCAAAGTGAATTTGAAGTTACTTATTTTCTTGCCAATGTAAGAGAGACATGTGAGAAAAATGGTATTGTTCAAGTACAAAAGCAACTTGTTCGCCATATCAATATAAGCTTAGATTTTAATGATGAGTATGATGGTAGAAGAACAATTCGGGATTCTTTGTGTCACAAAAAGGTTCTTCTTGTTGTTGATGATATAGATAAAGAAAAACAGTTGAAGAATTTGGCCGAGGAGCGAGACTGGTTTGGTTCTGGAAGCAGGATAATTATCACAACTAGAGACATGCACTTGCTAAAGATATATGATGCACATGAAATTTACAATGTTGAAGGGTTACCAGAAAGTGAAGCCTTTGATCTCTTTCATTTGAAGGCTTTTAAACAAAAAAAGCCTGCAGAAGAGTATTTGGATTTGTCCAAACAAGTGGTCAAATATTGTGCTGGTCTTCCATTGGCACTTGAGGTATTGGGTTCATATATTTATGGTAGACCTGTTGAAGATTGGCATAGTGCTCTTGCAAAATTAAAAAGCTTTCCACATGTCGACATTTTTGATACATTGAAAATAAGTTATGATGGTTTAGATTCCATGGACAAGGATATTTTTTTAGACGTTGCTTATTATTTCAAAGGATGGGATAAAAAATATGTAATAAATATATTAAAAGGGTGTGATTATCATGTTGAAATTGGTATTGCTACTTTGATCGATAGATCTCTACTCACTATAAACAAGTATGGTTTATTGGAGATGCATGATTTGCTTCAAGAAATGGGCACACATATTGTAATTCAAGAATCTCCAAACGATCCTAGCAAGCGTAGCAGGTTGCGGAGTTATGAGGACATCAATTTTGTTCTTACTCGAAACAAGGGAACTGAAGCAACTCATTGCATCGTTGGAGACAATTGGCGGTTATGTCGAGAACAAGAACAATATAGAATGCAATGGAGAGATTTAACATTTTCAAATATATGTCAGCTGAAGCTCCTCATTTTAAATGGCTTGAAAGCTCCAATTCTTAGCTATATTCCTTGTTCATTGAGAGTCTTGCGCTGGCAAGGTTGTCCGATGGAAACTCTGCCCTTTGTGGATCAATTCTATGAGCTTGTTGAAATTGATTTGTCTCTTAGCTACAGTATTGTTCAAGTATGGCATGGAAAAAAGTTTATGGAAAAGCTGAAGTACTTAAATTTGTCTAGTTGCCCTTTGCTGAAGCAACTTCCAGATCTTTCTGAAGCTCCCAATCTTGAAATACTAAACGTTGAATGTTGTTATCAACTGAATGATTTTCCCTCATATATCACATGCCACAAGAGCCTTGTTGAACTTATTTTATGGAAGTGCTCTAGGTTTGAAACTCTTGGAAGTAAATTGGAGATGAGTTCCCTCCAACAACTAGATATTGAGGGCTGCACAAGTATGAGGAAGCTTCCAGAATTTGGAAAATGCATGGAGCATTTATCAATTCTTTCTTTGTGTGGAACAGTCATAGAAGAACTACCCACAACAATTAGCTGTTTAGTTGGCCTAAAGGAGTTGCACTTAGACCTTTGCAAAAGGCTTACTTGCCTTCCAGACAGCATTCAAGAGTTAAAATCCCTCACAGTTCTGAGTCTTTCTTATTGCCCAAATGTCTTTCAATCTTTGCATTCTCTGTCTAGTCTGACCTCATTGGGTACTCTGAGATTATCGGCGTGTTTTCTCACATCTCATGAATCATTGTCTTACAATCTTGCCAACTTAGTGTCTTTGACTGATTTGGAGTTATCAGAAAACAATTTTGTAAGGGTTCCTATAAATATCCATGAACTCCCTAGGCTTAGATGTCTGAATCTAGACTGCTGTCCTAATCTGAAGGTTTTACCAGAGCTTCCATCAAGTATAAGAGTGGTATGTGCACGACATTGTGAATCACTGGATGCATGGAATTTGAATGTCACATCAGACTGCGTCTGGATTCAGAGCAATGACACTAAAGATGCATTTGTTTTTAAAGATAGGACATTGAGACATAGACACAGAAAGAGAAAATCGTGTTTGGGATATGAGACTGAGACATGGACAAAGAAATTGCGTCCTGGGAAACTGAATCCATCCTAA 2598 0.3822 MFAIVVLSPNYASSTWCLDEIQKIIECKNKLGQHIVPVFYGVDPSDVRHQKGTFGEAFTKHEHRFGEESDKVRRWREALTQVANYSGWSTKNQSEATLVENISQSIHKILIPSLPSSMNKLVGIDSRVEQVISHIGIGLNDVRYIGICGMGGIGKTTIARIVYEAIQSEFEVTYFLANVRETCEKNGIVQVQKQLVRHINISLDFNDEYDGRRTIRDSLCHKKVLLVVDDIDKEKQLKNLAEERDWFGSGSRIIITTRDMHLLKIYDAHEIYNVEGLPESEAFDLFHLKAFKQKKPAEEYLDLSKQVVKYCAGLPLALEVLGSYIYGRPVEDWHSALAKLKSFPHVDIFDTLKISYDGLDSMDKDIFLDVAYYFKGWDKKYVINILKGCDYHVEIGIATLIDRSLLTINKYGLLEMHDLLQEMGTHIVIQESPNDPSKRSRLRSYEDINFVLTRNKGTEATHCIVGDNWRLCREQEQYRMQWRDLTFSNICQLKLLILNGLKAPILSYIPCSLRVLRWQGCPMETLPFVDQFYELVEIDLSLSYSIVQVWHGKKFMEKLKYLNLSSCPLLKQLPDLSEAPNLEILNVECCYQLNDFPSYITCHKSLVELILWKCSRFETLGSKLEMSSLQQLDIEGCTSMRKLPEFGKCMEHLSILSLCGTVIEELPTTISCLVGLKELHLDLCKRLTCLPDSIQELKSLTVLSLSYCPNVFQSLHSLSSLTSLGTLRLSACFLTSHESLSYNLANLVSLTDLELSENNFVRVPINIHELPRLRCLNLDCCPNLKVLPELPSSIRVVCARHCESLDAWNLNVTSDCVWIQSNDTKDAFVFKDRTLRHRHRKRKSCLGYETETWTKKLRPGKLNPS 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91713g00004 865 Gene3D Ribonuclease Inhibitor 645 824 IPR032675 -
Stsc91713g00004 865 ProSiteProfiles TIR domain profile. 1 110 IPR000157 GO:0007165
Stsc91713g00004 865 PRINTS Disease resistance protein signature 144 159 - -
Stsc91713g00004 865 PRINTS Disease resistance protein signature 624 640 - -
Stsc91713g00004 865 PRINTS Disease resistance protein signature 218 232 - -
Stsc91713g00004 865 PRINTS Disease resistance protein signature 311 325 - -
Stsc91713g00004 865 Pfam NB-ARC domain 127 351 IPR002182 GO:0043531
Stsc91713g00004 865 Gene3D - 110 273 IPR027417 -
Stsc91713g00004 865 Gene3D Ribonuclease Inhibitor 481 644 IPR032675 -
Stsc91713g00004 865 Gene3D - 1 109 IPR035897 -
Stsc91713g00004 865 SMART till_3 2 85 IPR000157 GO:0007165
Stsc91713g00004 865 SUPERFAMILY L domain-like 416 809 - -
Stsc91713g00004 865 Gene3D - 276 365 IPR042197 -
Stsc91713g00004 865 Pfam TIR domain 1 116 IPR000157 GO:0007165
Stsc91713g00004 865 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 369 IPR027417 -
Stsc91713g00004 865 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 646 IPR044974 GO:0006952
Stsc91713g00004 865 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 88 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91713g00004 Stsc-Chr91713 16681 20360 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91713g00004 4 708 WRKY Transcription Factor Family AT4G12020 30.150 8.49e-84 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91713g00004 - - ahf:112769348 1210.28