Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91713g00001 ATGAAACATGTTTCTCTTAACAGGAATGAGGCAACATTGGTGGAAAAGATTTCTCAAAGTATACATGAGATATTGATTTCAAACTTGCCATCTTCCATGAACAAGCTTGTAGGCATTGATTCAAGAGTGGAACAAGTGATTAGTCACATTGGTATTGGCCTGAATGATGTTCGTTATATAGGCATATGTGGGATGGGCGGCATAGGTAAGACAACTACTGCTAGAATCGTATATGAAACCATCCAAAGTGAATTTGAAGTTACTTATTTTCTTGCCAATGTAAGAGAGACATGTGAGAAAAATGGTATTGTTCAAGTACAAAAAGAACTTGTTGACCTTATCAATGGTAGCTCGAATTTTATTAATGATGAGCATTATGGGAGGAGTAGAATTCAGGGTTCTTTGTGTCACAACAAGGCTCTGCTTGTTCTTGATGATATAGATAAAGAAGAACAGTTGAAGAATTTGGGTGGAGAGAAAAATTGGTTTGGTTGTGGAAGCAGGATAATTATCACAACCAGAGACAAGCATCTGCTAGATATATATGATGCACATGAAATTTACAATATTGAGCCGTTAGCAAAGAGTGAAGCCTTTGATCTCTTTTGTTGGAAGGCTTTTAAACAACCAAAGCCTGCAGAAAAGTATTTGGAATTGTCCAAACAGGTGGTCCAATATTGTGCTGGTCTTCCACTGGCACTTGATGTATTGGGTTCTTATCTTTGTAATAGATCACCTGGACAGTGGCGTAGTGCTCTTGCAAAATTAAAGAGCTGTCCATATCCTGACATTTTTAAACCCTTGAGAATAAGTTATGATGGTCTAGATTCCATGGAAAAGGAGATGTTTTTAGACATTGCTTATTTTTTCAAAGGATTCCCTAGAAAATATGTAATAAATATATTAAAAGGGTGTGATTATCATGTTGATATTGGTATTGCTAATTCGATCGATAGATCTCTACTCACTATAGATAAGAATGATAAATTTGAGATGCATGATTTGCTTGAAGAAATGGGCAAACATATTGTAATTCAAGAATCTCCGATGATTCTAGCAAGCGCAGTAGGTTGTGGACTTACGAGGACATCAAGTTTGTTCTTACTCGAGAAAAGGGATAGTAATGCATGGATGTTTCTTTATTCTGATCAGTTTTTGGAAAAGCTGAAGCGATTAAATCTTGATAGTTGCTCTGGGGTGAAACAAATTCCAGATCTTTCTGAAGCTCCCAATCTTGAATCACTTACCTTTTCAGGTACTAGTCTGATTGAATTTCCCTCGTATCTGACACGCCACAAGAGCCTTGTTATACTCAACTTGAATAATTGCCACTCTCTTACAACTCTTGGACGTAAATTGGAGATGAGTTCCCTACAGGAACTGAATCTTATCTACTGCTCAAAGTTTAGGAAACTTCCAGAATTTGGAGCGAGAATGCATGATACATTTATCAATTCTTAA 1461 0.3662 MKHVSLNRNEATLVEKISQSIHEILISNLPSSMNKLVGIDSRVEQVISHIGIGLNDVRYIGICGMGGIGKTTTARIVYETIQSEFEVTYFLANVRETCEKNGIVQVQKELVDLINGSSNFINDEHYGRSRIQGSLCHNKALLVLDDIDKEEQLKNLGGEKNWFGCGSRIIITTRDKHLLDIYDAHEIYNIEPLAKSEAFDLFCWKAFKQPKPAEKYLELSKQVVQYCAGLPLALDVLGSYLCNRSPGQWRSALAKLKSCPYPDIFKPLRISYDGLDSMEKEMFLDIAYFFKGFPRKYVINILKGCDYHVDIGIANSIDRSLLTIDKNDKFEMHDLLEEMGKHIVIQESPMILASAVGCGLTRTSSLFLLEKRDSNAWMFLYSDQFLEKLKRLNLDSCSGVKQIPDLSEAPNLESLTFSGTSLIEFPSYLTRHKSLVILNLNNCHSLTTLGRKLEMSSLQELNLIYCSKFRKLPEFGARMHDTFINS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91713g00001 486 Gene3D - 16 187 IPR027417 -
Stsc91713g00001 486 PRINTS Disease resistance protein signature 227 241 - -
Stsc91713g00001 486 PRINTS Disease resistance protein signature 134 148 - -
Stsc91713g00001 486 PRINTS Disease resistance protein signature 59 74 - -
Stsc91713g00001 486 PRINTS Disease resistance protein signature 384 400 - -
Stsc91713g00001 486 Gene3D Ribonuclease Inhibitor 341 481 IPR032675 -
Stsc91713g00001 486 Pfam NB-ARC domain 42 259 IPR002182 GO:0043531
Stsc91713g00001 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 286 IPR027417 -
Stsc91713g00001 486 SUPERFAMILY L domain-like 358 476 - -
Stsc91713g00001 486 Gene3D - 193 276 IPR042197 -
Stsc91713g00001 486 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 369 474 IPR044974 GO:0006952
Stsc91713g00001 486 SUPERFAMILY "Winged helix" DNA-binding domain 264 352 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91713g00001 Stsc-Chr91713 4697 6626 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91713g00001 37 348 WRKY Transcription Factor Family AT5G45050 33.016 1.06e-45 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91713g00001 - - ahf:112769348 511.916