Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91712g00004 ATGATCTGCACGGTGAAACAACCCAGTGTTACTGGGATCAGAGCCTCTGGCCTTGTTTTCCGTGAAAAGGGTCCAACCCAGGTTCACTCATGGCCTTCCATGATCACAACAAGAGAGAACAGATCACTGAGATCCCTTGTTTCGGTGCAGAAGCCACTGCACCTTTCTGCTGTTATTGGTGGTGTTGGGAAGCTTTCACTTTCAGTGAGGCGTGAGAGGAGTGAGTTTGTGACTTGTGGTGCATATGAGGCTGATAGATCAGAGCTTGAAGGAGCAGGAGCTAAGAAGGTTCCATCAGAGGCAGCTAAGAAGGTGAAGATTGGGATATACTTTGCAACATGGTGGGCTTTGAATGTGGTGTTCAATATATACAACAAGAAGGTGTTGAATGCTTACCCTTACCCTTGGCTCACTTCAACACTCTCACTTGCATGTGGTTCTCTCATGATGTTGATCTCATGGGCCACTGGGATTGCTGAGGCTCCTAAGACTGACCTTGATTTTTGGAAGACCTTGTTCCCTGTTGCTGTGGCACATACAATAGGACATGTAGCAGCAACAGTTAGTATGTCAAAGGTTGCAGTGTCATTCACTCATATCATCAAGAGTGGGGAACCTGCTTTCAGTGTACTGGTTTCCAGATTTATCTTGGGCGAAACCTTCCCGGTGCCGGTTTATTTGTCCTTGCTTCCAATCATTGGTGGTTGCGCGCTTGCTGCTGTGACTGAGCTTAATTTCAACATGACCGGTTTCATGGGGGCTATGATATCAAATTTGGCATTTGTTTTCCGCAATATCTTTTCAAAGAAGGGAATGAAGGGAAAGTCTGTCAGCGGAATGAATTACTACGCTTGTTTATCCATGTTGTCATTGGTAATTCTCACGCCATTCGCAATTGCGGTGGAGGGGCCACAAATGTGGGCAGCTGGATGGCAAACCGCCCTCTCTCAAATCGGACCTCAGTTTATATGGTGGGTGGCAGCTCAGAGTGTATTTTATCATCTTTACAATCAGGTGTCCTACATGTCTTTGGATGAGATCTCTCCATTGACATTTAGCATCGGAAACACCATGAAGCGTATATCTGTTATAGTTTCTTCGATCATTATCTTTCATACACCAGTTCAACCCATCAATGCACTTGGAGCCGCCATCGCCATCCTTGGAACCTTCTTGTATTCACAGGCAAAGCAGTAA 1197 0.4578 MICTVKQPSVTGIRASGLVFREKGPTQVHSWPSMITTRENRSLRSLVSVQKPLHLSAVIGGVGKLSLSVRRERSEFVTCGAYEADRSELEGAGAKKVPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATGIAEAPKTDLDFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPVPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLVILTPFAIAVEGPQMWAAGWQTALSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91712g00004 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 149 241 - -
Stsc91712g00004 398 PANTHER SOLUTE CARRIER FAMILY 35 106 397 - -
Stsc91712g00004 398 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 106 397 IPR004696 GO:0016020|GO:0022857|GO:0055085
Stsc91712g00004 398 Pfam Triose-phosphate Transporter family 106 394 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91712g00004 Stsc-Chr91712 11519 14642 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91712g00004 44 397 Antiporters AT5G54800 82.961 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91712g00004 K15283 - gmx:100801832 616.305