Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91679g00002 ATGGGGACTCACACTCAACCTCGCCCTATAACATGCAAAGCGGCGGTTGCTAGAAGAGCTGGTGACCCTTTGGTTATTGAAGACATCGTTGTGGCGCCGCCAGGACCCCGTGAAGTTCGAATTCGTGTTATATGTGCCTCTCTCTGCGGCAGCGATGCTACTTTCTTGAATCTCCAGGGGGGTCCTCCTGGATATTTTCCTAGAATTCTGGGTCATGAAGGAGTTGGGATTGTGGAAAGTGTAGGAAAAGATGTAACTGAAGTTACAAATGGAGATGTGGTTATGCCAATTTTTCTACCAGATTGTGGAAAGTGTACAGATTGCAAATCAACCAAGAGCAATCGCTGTACTAATTTCCCTTTCCGGGTATCCCCTTGGATGCCTCGAGATGGAACATCGAGATTCACTGATCAAAACGGAGAGATCATATATCATTTCATGTTTATTTCAAGTTTCAGTGAGTACACTGTCATTGACATTGCCAATCTAATCAAGATTGGCCCGGAAATTCCCCCAGACAGGGCATGCCTGCTTGGTTGTGGCGTATCAACTGGGGTAGGTGCTGCTTGGAGAACAGCAAATGTGGAGCCTGGGTCTACGGTAGCTATTTTCGGGCTGGGATCTGTTGGGTTTGCGGTTGCTGAGGGAGCTAGACTTTGTGGAGCTACTAGGATTATAGGTGTGGATATCAACCCAGAAAAATATGAAATTGGGAAAAAGTTTGGACTCACAGACTTCATCAATCCTAAAGAATGTGGAAACAAACCAGTGAGCCAGGTTATCATAGAGAAAACTGGCGGGGGAGCAGATTATTGCTTTGAGTGTGTTGGTATGGCATCACTTGTGCATGAAGCTTTTGCTTCTTGTAGAATGGGTTGGGGAAAAACAATTGTTGTAGGAGTGGACAAGCCAGGAGCCATGTTGAGCCTCAGTTCATATGAGGTACTTCATGATGGGAAGACCCTCATGGGATCCTTATTCGGAGGACTCAAACCGAAGACTCATGTGCCCATTCTCCTCAAAAGATACATGGACAAGGAACTGCAATTGGATGGGTTTGTCACTCATGAGGTGGAGTTTAAGGACATCAATAAAGCTTTTGATTTATTGTACAAAGGAGAGAGTCTCCGATGTGTGATTTGGATGCAAAGATGA 1155 0.4537 MGTHTQPRPITCKAAVARRAGDPLVIEDIVVAPPGPREVRIRVICASLCGSDATFLNLQGGPPGYFPRILGHEGVGIVESVGKDVTEVTNGDVVMPIFLPDCGKCTDCKSTKSNRCTNFPFRVSPWMPRDGTSRFTDQNGEIIYHFMFISSFSEYTVIDIANLIKIGPEIPPDRACLLGCGVSTGVGAAWRTANVEPGSTVAIFGLGSVGFAVAEGARLCGATRIIGVDINPEKYEIGKKFGLTDFINPKECGNKPVSQVIIEKTGGGADYCFECVGMASLVHEAFASCRMGWGKTIVVGVDKPGAMLSLSSYEVLHDGKTLMGSLFGGLKPKTHVPILLKRYMDKELQLDGFVTHEVEFKDINKAFDLLYKGESLRCVIWMQR 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91679g00002 384 FunFam S-(hydroxymethyl)glutathione dehydrogenase 185 325 - -
Stsc91679g00002 384 Gene3D - 16 378 - -
Stsc91679g00002 384 Pfam Zinc-binding dehydrogenase 209 329 IPR013149 -
Stsc91679g00002 384 Pfam Alcohol dehydrogenase GroES-like domain 37 165 IPR013154 -
Stsc91679g00002 384 FunFam Alcohol dehydrogenase 6 15 197 - -
Stsc91679g00002 384 SUPERFAMILY GroES-like 333 381 IPR011032 -
Stsc91679g00002 384 SUPERFAMILY GroES-like 5 193 IPR011032 -
Stsc91679g00002 384 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 170 345 IPR036291 -
Stsc91679g00002 384 Gene3D - 185 325 - -
Stsc91679g00002 384 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Stsc91679g00002 384 PANTHER ALCOHOL DEHYDROGENASE 9 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91679g00002 Stsc-Chr91679 11613 16560 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91679g00002 35 374 Monolignol Biosynthesis Gene Families AT2G21730 24.490 2.54e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91679g00002 K00121 - gmx:100817521 670.618