Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91657g00001 ATGTCAGACCCAAGTTATGCAAAGGCTGTGGCTGCTACAGCTGGGGCTATGTTACTTATTGCAGGGATTTTCTTTTACTTGTTCCAAAAATATGTACTTGCTACATACCCCAAGAGGCACAAATTTCCATATGATTATGAAGGTATAAGGAAATTTGTTGGAGGTAATGTGAAGGGACTAATTATTGAGGAAAATGGGGTTGATGTTCTTTATATGTTGGACACTGGAGGCAAACAGTTGGTAACAGGATTCACAAGCAGTAGATTCAATCCTAGTTTTGAAGATGATGATTTAGAAAAAGAAAAGAGAATAGATGTTGCGGTCCAAACATCCAAAATATCAAAGCCTAATAAGGTGACTCTGGAACCTCCACTTCCCCCACTATCACAAGCTTCAGCAATAATTCATGACAAGAAAACTCAACCACCACCACCTCCTCCTCCTCCTCCGACTCCACCTCCTCGACCTCCACTACCGCCACCGCCACGAAGGGCACTGCCACCTGGTCCACCTCCACCTCCACCTCCAAAGGCCTTAAAGCCCCCACCTGTGCCTAAAGGGAAACCAAACAGCCAAAGCACCAAAGAGGCTGTTACTTCAGGAGAGAGCACAAGAGAAAAGGGTGCAGGCGAAACAAGGCTTAAGCCTCTACATTGGGATAAAGTTATGGCTAATGTTGATCATTCAACAGTGTGGGATCAGATCAACGATGGGTCCTTTAGGGTCGATGATGAACGTATGGAAACACTCTTTGGTTATTCAACTACCAACAAAACTCAAGAAAGAAAGAAAAAAAGTGTCTCAACTTTGGCAAAGCCCAACTCTAACACACCAACTCAAATATTCATTTTGGAGCCAAGAAAATCCCAAAACATTGCAATTGTTATAAGATCACTTGCCACCTCACGCAGAGCCATCTTGGAAGCACTATGTGACGGCCAGGGACTCAGCGTTGAGACCCTCGAAAAGCTCACAAAAATAGCTCCCACAGAAGAAGAAGAATCCAAGATAATGCAGTTCAATGGCAACCCTGAAAGGCTGCAAGATGCCGAGTCTTTCCTCTACCACATCCTCAAAGCTGTTCCAACCACGTTCAATCGTCTCAAAGCGATGCTTTTCAGGTCCACTTATGACTCTGAAGTTCTTCAACTGAAGGAATATTTGCAAGCACTCGAAAACGGTTGCAGGGAACTGAGAACAAGTGCTCTGTTCCTGAAGCTTCTTGAGGCAATTCTCAAAGCTGGAAACAGAATGAATGCAGGAACATCACGAGGGAATGCAAAAGGTTTCAATTTGAGTGCTCTTAGAAAACTCTCTGATGTGAAAAGCACAGATGGGAAGACTAGTTTGCTTCACTTCATAGTGGAACAAGTGATTCAGTCAGAAGGTAAAAGAAAAGCTATGTATCAAAGAATAAGTGGCGAAAAAGAATACACAATGCTTGGTTTCACTGCGCTTGAAGCGTTAAGAGATGAGTTATCTGAAGCAAAGAAAGCGGCGAGCATAGAGTATCAAACTTTCATCACAATGTGTTCCAATCTAGATTCCTATGTAACTGAAATTAAGGAGATTGTAACAAAATGTTGTGGCAGCAACACTAGCATTGAAGGGTGTGGGTTTATAAAGGAAATGAAAGGGTTCGTAGAGGAATGTGAGGAAGAGCTTAAGGTTGTTAAAGAGGAGCAAACAAGGATCATGGATCTTGTGAGGAGAACTAATGATTATTATCTACCAGGAGCATTGTTATCTAAAGACAACAGCAATTTGACGAACCCGTTTGAATTGTTTGTGATCGTGAAAGACTTTGTTGATATGGTGGATCAGGCTTGTGTGGAGCTTAAAAGGAAGATGGAAATGGAAAAGAAGGGTGTTGCAGGAGCAGCAGAAGGTGGATTGGAACCATCAAAGAGGGCACCACCTAGATTTCCTAACTTTGATTTATATTTTCCACCAAATGCGCTGGAATCATCTACTTCGTTCAGCCAATCAGAAGGTGATTCCTGA 2004 0.4261 MSDPSYAKAVAATAGAMLLIAGIFFYLFQKYVLATYPKRHKFPYDYEGIRKFVGGNVKGLIIEENGVDVLYMLDTGGKQLVTGFTSSRFNPSFEDDDLEKEKRIDVAVQTSKISKPNKVTLEPPLPPLSQASAIIHDKKTQPPPPPPPPPTPPPRPPLPPPPRRALPPGPPPPPPPKALKPPPVPKGKPNSQSTKEAVTSGESTREKGAGETRLKPLHWDKVMANVDHSTVWDQINDGSFRVDDERMETLFGYSTTNKTQERKKKSVSTLAKPNSNTPTQIFILEPRKSQNIAIVIRSLATSRRAILEALCDGQGLSVETLEKLTKIAPTEEEESKIMQFNGNPERLQDAESFLYHILKAVPTTFNRLKAMLFRSTYDSEVLQLKEYLQALENGCRELRTSALFLKLLEAILKAGNRMNAGTSRGNAKGFNLSALRKLSDVKSTDGKTSLLHFIVEQVIQSEGKRKAMYQRISGEKEYTMLGFTALEALRDELSEAKKAASIEYQTFITMCSNLDSYVTEIKEIVTKCCGSNTSIEGCGFIKEMKGFVEECEEELKVVKEEQTRIMDLVRRTNDYYLPGALLSKDNSNLTNPFELFVIVKDFVDMVDQACVELKRKMEMEKKGVAGAAEGGLEPSKRAPPRFPNFDLYFPPNALESSTSFSQSEGDS 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91657g00001 667 SMART it6_source 204 621 IPR015425 -
Stsc91657g00001 667 Pfam Formin Homology 2 Domain 210 606 IPR015425 -
Stsc91657g00001 667 ProSiteProfiles Formin homology-2 (FH2) domain profile. 204 632 IPR015425 -
Stsc91657g00001 667 MobiDBLite consensus disorder prediction 139 188 - -
Stsc91657g00001 667 MobiDBLite consensus disorder prediction 200 216 - -
Stsc91657g00001 667 PANTHER FORMIN-RELATED 7 644 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Stsc91657g00001 667 MobiDBLite consensus disorder prediction 136 216 - -
Stsc91657g00001 667 MobiDBLite consensus disorder prediction 651 667 - -
Stsc91657g00001 667 Gene3D Formin, FH2 domain 225 630 IPR042201 -
Stsc91657g00001 667 Coils Coil 541 561 - -
Stsc91657g00001 667 MobiDBLite consensus disorder prediction 624 667 - -
Stsc91657g00001 667 SUPERFAMILY Formin homology 2 domain (FH2 domain) 144 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91657g00001 Stsc-Chr91657 2902 5733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91657g00001 5 665 FH2 protein (formin) Gene Family AT1G70140 38.934 1.09e-142 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91657g00001 - - gsj:114409782 759.599