Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91648g00004 ATGGAATCTTTTATTTCAGCTGAGAACACTAACCAACCCAACCCAACTCCGTTCCCACTATTCCCACCGGGAATCCCAATCCCTCCGACGGCCAGAGAAAACGCCGTAACGGCCACCGCCGCTAAAATTCCAACGCCATTTCTCTTAATACCCAAACCCGAACCCGTTGAAGAATGCAGCACTCCGATCCCCATCCCCACCGCCACCGCCACCGCTAACAACGAAGATATCAAACCTATATTCCATAGTGGGCCCCACCGGGAAACCCTAACTGCACCTACACCTCCTTCAGCCACCTCATCCGACCAAAACGACAGCGAAAATGCCTTATACGACGAGTTCAATCGAGTCTCTCAGCTCTTCCGTATGGCTTTCGGACCGGGGATGCAGCAGCTTGAAGCATCTCCGCAAAACGAGTTCTCAAACGACACCGTTTTGGACCCTAATTCGGGGGCTATTGTACCGGTGCCTCCTCCGCAGCAGCACGGGGGTTACGGGAACGGAAACGATGCCGGAGGGGGCGAGGGTTCTTCGTCAAACGGCGGGAACATGTCGCTGGCGAAGAGGAGTATTAGGTCGAAGGATCTTGTGAGGGTAAAAGATCTGACCATTAAGGACATGCGCCATTTCCGTGAGGTGGTGAGGCGGACGAGGATGATCTATGACTCGCTTCGGGTGCTGGCGACGGCGGAGGAGGAGAGGAAGTTGATGATGGCTGATTGGAAGAAGGCCAGAGGGGACCTTAGGGCTTCGAATTTGATGAAAACTTGCGGGCTTTGGCTTAACCGCGACAAGAGGATCGTCGGCGCCATCCCCGGGGTTTGTATTGGGGATGTGTTCCTATACAGGATGGAATTATGTATTGTAGGCCTTCACGGGCAGACGCAGGCCGGAATTGATTATCTCCCGGCTAGTTTGAGCTCGAACGGTGAGCCAATTGCCACCAGTGTCATTGTTTCTGGTGGCTATGAGGATGATATGGATGAGGGTGATGTTATCATTTACTCGGGTCATGGGGGCCAGGACAAGCATTATAAGCAGGTGTTTCATCAGAAGTTGGAAGGTGGGAACTTGGCATTGGAGAGGAGTATGTACTATGGGATTGAGGTGAGGGTTATTCGGGGATTGCAGTGCGAGGGAACTGTCAACGCAACTGGTAAGGTTTATGTTTATGATGGGTTGTATAGGATTATTGATTGCTGGTTTGATGTTGGGAAGTCTGGTTTTGGTGTTTATAAGTATAAGCTGTTTAGGATTGATGGGCAGCCTAAGATGGGTAGTGCTGTTCTTAAGGAGGCTGGTATGCTTAAGAGGGATCCATTGTGTTTTAAGCCTATGTGTTGTTTGTCTCTTGATATTTCGCAACGGCGGGAGCCTGTTGGGGTTCGGCTTTTTAATGACATTGATAAGAATCGTGACCCGCTTTGTTACGAGTATCTTCCAAAGACTAATTTTCCAGCATTCGTGTTTCACCAGACTGGGAATGGCACAGGTTGTCAGTGTGTGAATGGTTGTTTTGAAGGCTGCTTTTGTGTCATGAAAAATGGAGGTGAATTTGCTTATAATCAGAGTGGGATTCTGTTGAGAGGGAAGCCTGTAATATTTGAATGTGGCCCCTTTTGCCGATGTTCTCCAAATTGTCAGAATCGTGTCACACAGAAGGGGTTGAAAAGTAGGTTGGAAGTGTTTAGGTCTAGGGAAACTGGCTGGGGAGTTAGATCCTTGGACCTTATACAAGCTGGTGCTTTTATATGCGAATATACAGGTGTTGTCGTAACCAGGCAGCAAGCACAAATTTTGACCATGAATGGTGATGCATTAATATATCCTAATCGGTTTACTGACAGGTGGGCAGAATGGGGGGATGTATCTTTAATAAATCCCAGTTATGTTCGTCCATCATTTCCGTCAATACCTCCTTTAGATTTTGCTTTGGATGTGTCAAGAATGAGGAATGTAGCCTGCTATATGAGTCATAGTTCATCTCCAAATGTGTTGGTTCAGTTTGTTCTGTATGATCACAACAATTTAATGTTCCCTCACCTTATGCTATTTGCAATGGAGACCATCCCACCGATGAGAGAGCTTAGCCTTGATTACGGGGTGACTGATGAGTGGACAGGCAAGCTCGCTATATGTAACTGA 2145 0.4802 MESFISAENTNQPNPTPFPLFPPGIPIPPTARENAVTATAAKIPTPFLLIPKPEPVEECSTPIPIPTATATANNEDIKPIFHSGPHRETLTAPTPPSATSSDQNDSENALYDEFNRVSQLFRMAFGPGMQQLEASPQNEFSNDTVLDPNSGAIVPVPPPQQHGGYGNGNDAGGGEGSSSNGGNMSLAKRSIRSKDLVRVKDLTIKDMRHFREVVRRTRMIYDSLRVLATAEEERKLMMADWKKARGDLRASNLMKTCGLWLNRDKRIVGAIPGVCIGDVFLYRMELCIVGLHGQTQAGIDYLPASLSSNGEPIATSVIVSGGYEDDMDEGDVIIYSGHGGQDKHYKQVFHQKLEGGNLALERSMYYGIEVRVIRGLQCEGTVNATGKVYVYDGLYRIIDCWFDVGKSGFGVYKYKLFRIDGQPKMGSAVLKEAGMLKRDPLCFKPMCCLSLDISQRREPVGVRLFNDIDKNRDPLCYEYLPKTNFPAFVFHQTGNGTGCQCVNGCFEGCFCVMKNGGEFAYNQSGILLRGKPVIFECGPFCRCSPNCQNRVTQKGLKSRLEVFRSRETGWGVRSLDLIQAGAFICEYTGVVVTRQQAQILTMNGDALIYPNRFTDRWAEWGDVSLINPSYVRPSFPSIPPLDFALDVSRMRNVACYMSHSSSPNVLVQFVLYDHNNLMFPHLMLFAMETIPPMRELSLDYGVTDEWTGKLAICN 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91648g00004 714 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 129 714 IPR025794 GO:0016571
Stsc91648g00004 714 Pfam SET domain 569 701 IPR001214 GO:0005515
Stsc91648g00004 714 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 250 434 - -
Stsc91648g00004 714 SMART preset_2 450 542 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Stsc91648g00004 714 MobiDBLite consensus disorder prediction 172 187 - -
Stsc91648g00004 714 SMART set_7 558 707 IPR001214 GO:0005515
Stsc91648g00004 714 MobiDBLite consensus disorder prediction 90 106 - -
Stsc91648g00004 714 Gene3D SET domain 427 714 IPR046341 -
Stsc91648g00004 714 ProSiteProfiles YDG domain profile. 269 418 IPR003105 -
Stsc91648g00004 714 ProSiteProfiles Pre-SET domain profile. 497 555 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Stsc91648g00004 714 SUPERFAMILY SET domain 442 713 IPR046341 -
Stsc91648g00004 714 MobiDBLite consensus disorder prediction 133 187 - -
Stsc91648g00004 714 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 174 702 - -
Stsc91648g00004 714 MobiDBLite consensus disorder prediction 81 106 - -
Stsc91648g00004 714 Pfam Pre-SET motif 453 550 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Stsc91648g00004 714 Pfam SAD/SRA domain 268 422 IPR003105 -
Stsc91648g00004 714 SMART G9a_1 264 422 IPR003105 -
Stsc91648g00004 714 Gene3D - 266 426 IPR036987 -
Stsc91648g00004 714 ProSiteProfiles SET domain profile. 558 701 IPR001214 GO:0005515
Stsc91648g00004 714 SUPERFAMILY PUA domain-like 250 430 IPR015947 -
Stsc91648g00004 714 MobiDBLite consensus disorder prediction 133 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91648g00004 Stsc-Chr91648 14514 19030 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91648g00004 211 703 Su(var)3-9 homologs AT5G04940 40.319 8.07e-104 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Stsc91648g00004 SAD_SRA 1e-46 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91648g00004 K11420 - gmx:100795514 935.25