Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91635g00002 ATGTCCCATCATCAGCAAGATTACCACCAGCAGCAAGCGCAAGGAATCTACAGCTTCCCCAATGGATTCGAGAGATCAACGGTGACACACCAACAACCACAGATCCGAAGGGACAACAACAAAGCCTTCGATGCACCGCCACCACCATTAGTAGGGATAGACGAGGAAGAAGAACAACCAGCAGGAGCAGGAGGAGGAGGAGGAGGAGGAAGTCTTCCTCATGTGTATGAAACCGCAGGCATGCTTTCTGAGATGTTCAGTTTCCCCGCCACGGAGCTTCTCGAACAGCAGCACCACCACTTCCGGCCTACTTCCTCCTCCAGTAGGCCACAACCACCGGAGAACTGGTACGGAAGCAGGCAAGGCATGGCAGCCACGACGCAGCAGATTTCAAGCATGAATGCGGATTCAGCAGCAGCCATGCACCTTTTTCTGATGAATCCATCAGCTCAAAGGAGATCTCCTTCGCCTCCTCCATCGGCTACCTCTTCCACTCTCCACATGCTTCTTCCCAACCATTCCTCTAACTCCTTGCAAGCCTTCCCCCCTCCTCCTCCTCCTCATCCTCCTGGCTCCGCAGGAGGATCTTTCGGGCAATTCACATGGGTTCCCGATAGCGGCGGCGGCCATGAAGGAGCAAGTAACAACCCAGGTGGTGGTGGTCCTGGGCATCACGAGATAAACGTGGTGGAAGGGCAAGGCCTTTCGCTGTCTCTATCGTCCTCGCTTCAGCACTTGGAAGCTGCGAAAGCGGAGGAACAACTGAGGATGGGAGAAGGTGGTTTTCTGTTTTACAATCAAGGAAGCGGCAGCGGCGGAGGAGGCCCCTCTTCTAATTCCGGTGGTCATTTTCCTTACAAGAACCAACAACCGCAGCAATTGCATTTGCAAGGTGCTATGGTGGGAGTGGGACATCAGGGGCACCTTAGTGGATTCTCTTCTGCTTCATCGTCCCCGTCCTTAGGGGTAGTCCATGTTCTGAGGAATTCAAAGTATGTGAAGGCCGCGCAAGAATTGCTTGAGGAATTTTGCAGCGTTGGAAGGGGCCACTTCAAGAAGAACAAATTCAACAGACAGAATTCAAACCCTAATTCTACGGCGTCTCCGTCGTCTTCAAAAGATCCTCCTCCTTCAGCTCCGCCTCCTTTGTCAGCTTCCGATAGGATTGAGCATCAGAGAAGAAAGGTCAAACTTCTATCAATGCTTGATGAGGTGGACCGAAGATACAACCACTACTGCGAGCAAATGCAGATGGTGGTGAACTCATTTGACGTGGTGATGGGGTACGGGGCGGCGGTGCCGTACACGGCGCTGGCACAGAAGGCCATGTCGAGGCATTTCCGGTGCCTCAAGGATGCGATAACGGCGCAGCTGAAGCATTCGTGCGAGGTTTTGGGGGAGAAGGAGGGGGCGGGAGGATCTGGTCTGACGAAGGGGGAGACGCCGCGTCTGAAGATGCTGGAGCAGAGCCTCCGGCAGCAGAGGGCGTTCCAGCAGATGGGTATGATGGAGCAAGAAGCTTGGAGACCTCAGCGAGGCTTGCCTGAACGTTCTGTCAACATTTTGAGAGCTTGGCTTTTCGAGCATTTTCTCCATCCGTA 1601 0.5384 MSHHQQDYHQQQAQGIYSFPNGFERSTVTHQQPQIRRDNNKAFDAPPPPLVGIDEEEEQPAGAGGGGGGGSLPHVYETAGMLSEMFSFPATELLEQQHHHFRPTSSSSRPQPPENWYGSRQGMAATTQQISSMNADSAAAMHLFLMNPSAQRRSPSPPPSATSSTLHMLLPNHSSNSLQAFPPPPPPHPPGSAGGSFGQFTWVPDSGGGHEGASNNPGGGGPGHHEINVVEGQGLSLSLSSSLQHLEAAKAEEQLRMGEGGFLFYNQGSGSGGGGPSSNSGGHFPYKNQQPQQLHLQGAMVGVGHQGHLSGFSSASSSPSLGVVHVLRNSKYVKAAQELLEEFCSVGRGHFKKNKFNRQNSNPNSTASPSSSKDPPPSAPPPLSASDRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDVVMGYGAAVPYTALAQKAMSRHFRCLKDAITAQLKHSCEVLGEKEGAGGSGLTKGETPRLKMLEQSLRQQRAFQQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHP 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91635g00002 533 MobiDBLite consensus disorder prediction 1 74 - -
Stsc91635g00002 533 MobiDBLite consensus disorder prediction 178 192 - -
Stsc91635g00002 533 MobiDBLite consensus disorder prediction 353 390 - -
Stsc91635g00002 533 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 175 533 - -
Stsc91635g00002 533 MobiDBLite consensus disorder prediction 98 119 - -
Stsc91635g00002 533 MobiDBLite consensus disorder prediction 149 168 - -
Stsc91635g00002 533 MobiDBLite consensus disorder prediction 356 372 - -
Stsc91635g00002 533 MobiDBLite consensus disorder prediction 266 293 - -
Stsc91635g00002 533 MobiDBLite consensus disorder prediction 173 227 - -
Stsc91635g00002 533 Pfam Associated with HOX 326 455 IPR006563 -
Stsc91635g00002 533 MobiDBLite consensus disorder prediction 1 38 - -
Stsc91635g00002 533 SMART prehox3 321 456 IPR006563 -
Stsc91635g00002 533 MobiDBLite consensus disorder prediction 270 293 - -
Stsc91635g00002 533 MobiDBLite consensus disorder prediction 100 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91635g00002 Stsc-Chr91635 15826 19228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91635g00002 15 533 Homeobox Transcription Factor Family AT4G36870 49.270 9.95e-125 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91635g00002 - - adu:107487904 682.945