Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91600g00002 ATGGAGGAAATTAAAGGGTTCAATTGTGGCGAAAGTAAAAGCCCCATTGATGGTAGACCTCCCAATCCACCTTCTTCTGCTGCTTCCGCCTTTCGCCAATGCCTTCACAACAAGAAACCCCTTGTTCGCCATCCTTCTCTTATGATGACGAAGCTTTGTGATGTGTCTGCTGAGCCAGTGTGCGCCACTGAAGATTGTCAGTCTGATTTCCTTCCAAAGCTTCGTTCTGGAGCATGTGCTGATATGGGGTTCCGGTCAAGTATGGAAGATGTTTATGTTTGCGTTGACAACTTTACACAAGAGAATGGGCTCAAGAACGAAACAGAGGGACCTAGTGCTTTCTATGCGGTATTTGATGGACATGGTGGAAAGCATGCCGCTGACTTTGTTTGCCACCATTTGCCGAAGTTCATTATTCATGATGACAATTTCCCAAGTGATATTGAGAGGATAGTTACTTCAGCATTTCTAAAAACGGACAATGCTTTTGCTGAAGCTTGCTCTATAGATGCTACCCTTGCATCTGGAACTACGGCATTGGCTGCTCTTGTTATTGGAAGGCAGCTGGTTGTAGCAAATGCTGGAGATTGCCGAGCGGTGCTGTGTCGCCGTGGAAAAGCAATTGAAATGTCAAGAGATCATAAACCTGTGTGCATGAAAGAAAAGAAGCGTATTGAGGCATCCGGAGGGTATGTCTATGATGGATATCTTAACGGACAACTTAATGTCGCTCGTGCTATTGGCGACTGGCACATGGAAGGGATGAAAAGCCGAGGTGGTGGACCGCTAAGCGCAGAACCTGAGTTTATGAGTACAAAACTCACTGCCGAGGATGAATTCCTCATCATGGGTTGTGATGGGATTTGGGATGTATTTAGGAGCCAGAATGCAGTGGACTTTGCTCGCCGCAGGCTTCAGGAGCATAATGACCCCACCATGTGTAGCAAGGATTTAGTTGATGAGGCGTTAAAAAGAAAGAGTGGAGACAATTTATCTGCTGTCGTAGTTTGCTTCCAGCAACAACCTCCACCTAACTTGGTAATGCCGCGCTCTAGAGTGCATAGGAGCTTCTCCGCCGAAGGTTTGAGGGAGTTGCAAAGCTTCCTGGATAGCTTAGGTAATTGA 1125 0.4649 MEEIKGFNCGESKSPIDGRPPNPPSSAASAFRQCLHNKKPLVRHPSLMMTKLCDVSAEPVCATEDCQSDFLPKLRSGACADMGFRSSMEDVYVCVDNFTQENGLKNETEGPSAFYAVFDGHGGKHAADFVCHHLPKFIIHDDNFPSDIERIVTSAFLKTDNAFAEACSIDATLASGTTALAALVIGRQLVVANAGDCRAVLCRRGKAIEMSRDHKPVCMKEKKRIEASGGYVYDGYLNGQLNVARAIGDWHMEGMKSRGGGPLSAEPEFMSTKLTAEDEFLIMGCDGIWDVFRSQNAVDFARRRLQEHNDPTMCSKDLVDEALKRKSGDNLSAVVVCFQQQPPPNLVMPRSRVHRSFSAEGLRELQSFLDSLGN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91600g00002 374 SUPERFAMILY PP2C-like 69 340 IPR036457 -
Stsc91600g00002 374 Gene3D - 53 342 IPR036457 -
Stsc91600g00002 374 PANTHER PROTEIN PHOSPHATASE 2C 67 336 IPR015655 GO:0004722|GO:0006470
Stsc91600g00002 374 CDD PP2Cc 75 338 IPR001932 -
Stsc91600g00002 374 MobiDBLite consensus disorder prediction 1 29 - -
Stsc91600g00002 374 SMART PP2C_4 65 336 IPR001932 -
Stsc91600g00002 374 ProSiteProfiles PPM-type phosphatase domain profile. 75 338 IPR001932 -
Stsc91600g00002 374 ProSitePatterns PPM-type phosphatase domain signature. 114 122 IPR000222 GO:0043169
Stsc91600g00002 374 Pfam Protein phosphatase 2C 76 330 IPR001932 -
Stsc91600g00002 374 FunFam Probable protein phosphatase 2C 22 60 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91600g00002 Stsc-Chr91600 13334 16459 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91600g00002 1 374 PP2C-type Phosphatase Gene Family AT2G25620 65.306 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91600g00002 K14803 - gmx:100815725 603.208