Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91593g00001 ATGTTTCCAGCAATACTACCACTTCCATTGCTCTTTCTTGCACTCTCACTCACCATATATTTCCTAATAAGTAAGCATTATGATAGATCACTCCCACCGGGACCACCGGCATTTCCGGTCCTCGGTAACCTGCCCATGCTACTGGGGAAGCTCCCACACCGCACCCTCCAAGCCATGGCTCGAAGATACGGCTCCATCATGTCGTTGCGGTTAGGACAGGTCCCAACCGTGGTTCTCTCAAACTCCGAAGCCGTAGAAGTGTTCCTCAAGACACACGACGCTGTTTTTGCGAGCCGCCCTAAAATGCAAGCCACGGAGTACGTAGTATACGGTTCCAAAGGGTTGGTGTTCTCGGAATACGGACCGTACTGGCGCAACATGAGGAGAGTGTTTACGTCGCAGCTTCTGAGTGTGTCGAAGGTGTCGTCCTTTACGCATGTGAGAGAGAGGGGTGTGAAAGTGGCGGTGAAATCGATCAAGAGAGCCGCGGAAAGGGGTGAAGTGATGGACATTAGTGAATTGGTTTATCATGTTACAGAGGATGTTGTCTATAGGATAGTGCTGGGGCGTAGTAGGAATGATCAGTCTGATTTGGCAAGCCTACTTCATGAGGCTATTAGCCTCGCCGGAGCCTTTAATCTCGCAGATTACATGCCTTGGCTTGGATCTTTTGATCTTCAGGGATACACACGAAGGTTGAAGAGACTTGGTAAAGCCGTTGACCAGGAGTTGGAGAAGATCATTGCGGAGCATGAGAAGGCTGATTCGGGTGCACAACATGCCTCGGGGGACCATAGGGATTTTATTGACATATTACTCTCCCTTGTTAACCAACCCATTGATCCAAATGATGAGCAGAGCCAAGTCATGGATCGAACCAACGTTAAGGCCACACTCCTAGATTCTATTGCAGGGTCATTTGAAACCTCTGCAACCGTTGTTATATGGGTTTTGTCCGAGCTCTTAAAGCATCCAAGAGTGATGAGAAAGCTTCAAGATGAGCTAACTAATGTGGTTGGATTGAACAAATTTGTTCAAGAGACCCATTTAGCAAACCTAACTTACTTGGATATTGTGATCAAAGAATCACTAAGATTACATCCTCCTGGAGCAATAGTGACCCGTGCGTCAACAAAAGATGCTATAGTTAATGGTTATCGTATTAAAAAAAATATAATGATCCTAATAAACTTGTGGGCCATAGGAAGAGATCCTAAAGCATGGTCTGATAATGCTGGAGAGTATTACCCGGAGAGATTTATAGCAAACAATTGTGACTACCGTGGCTACAACTTTCATTTTATACCATTTGGTGCTGGTAGCAGAGGGTGTCCCGGAATACACCTTGGACTAACTATGGTGAAACTTGTTGTGGCTCAGTTTGTACATTGCTTCAATTGGGAACTACCATCGAACATGGCTCCAGATGACTTGGACATGAGCGAGAAATTTGGCCTCTCACAACCAAGAGCCAAGAACTTGCTAGCTGTGCCAACTTATCGTCTTACGTGCGAAATTCAAGAGGACAAACCTTAA 1536 0.4596 MFPAILPLPLLFLALSLTIYFLISKHYDRSLPPGPPAFPVLGNLPMLLGKLPHRTLQAMARRYGSIMSLRLGQVPTVVLSNSEAVEVFLKTHDAVFASRPKMQATEYVVYGSKGLVFSEYGPYWRNMRRVFTSQLLSVSKVSSFTHVRERGVKVAVKSIKRAAERGEVMDISELVYHVTEDVVYRIVLGRSRNDQSDLASLLHEAISLAGAFNLADYMPWLGSFDLQGYTRRLKRLGKAVDQELEKIIAEHEKADSGAQHASGDHRDFIDILLSLVNQPIDPNDEQSQVMDRTNVKATLLDSIAGSFETSATVVIWVLSELLKHPRVMRKLQDELTNVVGLNKFVQETHLANLTYLDIVIKESLRLHPPGAIVTRASTKDAIVNGYRIKKNIMILINLWAIGRDPKAWSDNAGEYYPERFIANNCDYRGYNFHFIPFGAGSRGCPGIHLGLTMVKLVVAQFVHCFNWELPSNMAPDDLDMSEKFGLSQPRAKNLLAVPTYRLTCEIQEDKP 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91593g00001 511 Pfam Cytochrome P450 32 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91593g00001 511 PANTHER CYTOCHROME P450 93A3-LIKE 11 502 - -
Stsc91593g00001 511 SUPERFAMILY Cytochrome P450 32 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91593g00001 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Stsc91593g00001 511 CDD CYP71-like 62 494 - -
Stsc91593g00001 511 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91593g00001 511 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91593g00001 511 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91593g00001 511 Gene3D Cytochrome P450 23 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91593g00001 511 FunFam Cytochrome P450 83B1 20 497 - -
Stsc91593g00001 511 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91593g00001 511 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91593g00001 511 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91593g00001 511 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91593g00001 511 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91593g00001 511 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91593g00001 Stsc-Chr91593 3196 4937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91593g00001 32 506 Monolignol Biosynthesis Gene Families AT5G04330 36.853 1.20e-113 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91593g00001 - - gmx:100814172 593.578