Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91576g00001 ATGGCTTCTAGATTGGTGATTGCTTTGGCTATCTTTGCCCTTGTATTGGGGCATGGAAATGCTCAACTTTCCACAAACTTCTACGCTAGTTCATGCCCCAAACTCTTTTCCACTGTGAAATCCACAGTGCAATCTGCCGTATCAAAGGAAGCCCGTATGGGTGCTTCTCTCCTCCGTTTGTTCTTCCATGATTGCTTTGTCAATGGATGTGATGGATCGATTCTATTAGACGACACATCAAGCTTCATCGGAGAGAAGAACGCAAACCCAAACAAGAACTCAGCCCGTGGATTCGAAGTCATTGACGCCATCAAATCTGCCATTGAGAAAGTGTGCCCTGGTGTTGTCTCTTGCGCTGATATCCTCGCCATTGCTGCTAGAGACTCTGTTCAGATCCTTGAAGGCCCAAATTGGGACGTCAAACTTGGAAGAAGAGATNNNNNNNNNNCCGCCAGCCAGTCCGCCGCCAACAACGGCATCCCTCCACCCACTTCCAACCTCAACCAACTCATCTCCAGGTTCAGTGCTCTTGGACTTTCCACCAAGGACTTGGTCGCTCTTTCAGGTGGTCACACAATTGGACAAGCAAGGTGCACCAACTTCAGAGCGAGAATCTACAACGAGAGCAACATAGAAGCTTCATTCGCCACAAGCAAGAAAACCAACTGCCCAAGAGCATCCGGTACAGGGGATAACAACCTTTCCCCGCTTGATCTCCAAACACCCACAGCGTTCGACAACAACTACTTTAGGAACCTTGTTCAGAACAAGGGGCTCCTCCACTCCGACCAGCAACTCTTCAACGGTGGCTCCACCGACTCTATAGTCAGAGGCTACGCCTCCAACCCTTCCTCCTTCTCCTCTGACTTCATCAGCGCCATGATCAAGATGGGAGACACTAGTCCCCTCACTGGTTCCAACGGTGAAATCAGGAAGAACTGCAGGAGGATCAACTAA 957 0.4922 MASRLVIALAIFALVLGHGNAQLSTNFYASSCPKLFSTVKSTVQSAVSKEARMGASLLRLFFHDCFVNGCDGSILLDDTSSFIGEKNANPNKNSARGFEVIDAIKSAIEKVCPGVVSCADILAIAARDSVQILEGPNWDVKLGRRDXXXXASQSAANNGIPPPTSNLNQLISRFSALGLSTKDLVALSGGHTIGQARCTNFRARIYNESNIEASFATSKKTNCPRASGTGDNNLSPLDLQTPTAFDNNYFRNLVQNKGLLHSDQQLFNGGSTDSIVRGYASNPSSFSSDFISAMIKMGDTSPLTGSNGEIRKNCRRIN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91576g00001 318 FunFam Peroxidase 26 169 - -
Stsc91576g00001 318 CDD secretory_peroxidase 22 317 IPR033905 GO:0004601|GO:0042744
Stsc91576g00001 318 ProSiteProfiles Plant heme peroxidase family profile. 22 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc91576g00001 318 Pfam Peroxidase 39 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc91576g00001 318 FunFam Peroxidase 161 297 - -
Stsc91576g00001 318 Gene3D Peroxidase, domain 2 161 297 - -
Stsc91576g00001 318 Gene3D - 26 318 - -
Stsc91576g00001 318 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Stsc91576g00001 318 PANTHER PEROXIDASE 72-RELATED 20 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc91576g00001 318 SUPERFAMILY Heme-dependent peroxidases 22 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc91576g00001 318 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc91576g00001 318 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc91576g00001 318 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc91576g00001 318 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc91576g00001 318 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc91576g00001 318 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc91576g00001 318 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc91576g00001 318 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc91576g00001 318 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc91576g00001 318 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc91576g00001 318 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc91576g00001 318 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc91576g00001 318 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc91576g00001 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc91576g00001 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91576g00001 Stsc-Chr91576 10533 13481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91576g00001 21 318 Peroxidase AT5G05340 75.503 2.01e-170 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91576g00001 K00430 - gmx:100803637 519.62